| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2224 |
|---|
| Symbol | aat |
|---|
| ID | 5080346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2561518 |
|---|
| End bp | 2562228 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640499386 |
|---|
| Product | leucyl/phenylalanyl-tRNA--protein transferase |
|---|
| Protein accession | YP_001183744 |
|---|
| Protein GI | 146293320 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2360] Leu/Phe-tRNA-protein transferase |
|---|
| TIGRFAM ID | [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000187963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTCAC TGTCTTTTCT GAATCACGAA TTTGAAGCTT TTCCTTCACC CGAACTCGCC
TTAACGGATC CCAATGGATT ACTGGCGATT GGCGGTGACT TACGTCCAGA ACGCTTACTG
ACCGCTTATT ATAACGGAAT TTTCCCTTGG TTTAATGCCG ATGATCCTAT TCTTTGGTGG
TCACCCGATC CCCGCGCAAT ATTTATGCTC GGTAAAATCC GTATCAGTAC AAGTTTATGC
AAGTATCTAA AAAAACAGCC ATGGCATTTC ACCATCAATC ATGCCTTTAC TTCTGTGATG
GCAGGATGTG CCGAGCCACG TCCAAAGCAA AATGGCACTT GGATAACCGA TGAGATTCAA
ATGGCTTACC GTGAATTACA TCAAAATGGC CATGCACATT CTATTGAGGT ATGGGAAGGT
GAGCAATTAA TTGGCGGCCT TTATGGTTTA GCCATAGGGC AAGTGTTTTG TGGTGAATCG
ATGTTTCACC GCCAAACCAA TGCCTCAAAA GCGGCAATAG TGGTATTACA ACAACATTTA
ATCAAAAGGG GATTTAAACT GATTGATGCT CAGGTAATGA ACCCACATCT AGAAAGCTTG
GGAGCAAAGG CGATTAAACG AACTCATTTT ATTGAATTAC TGACCCAATT TAGGGACAAA
AAAGTGCATC CAGATGCTTG GATACCCAGT GAGGTGTTCC TTGAACTCTA A
|
|---|
| Protein sequence | MKSLSFLNHE FEAFPSPELA LTDPNGLLAI GGDLRPERLL TAYYNGIFPW FNADDPILWW
SPDPRAIFML GKIRISTSLC KYLKKQPWHF TINHAFTSVM AGCAEPRPKQ NGTWITDEIQ
MAYRELHQNG HAHSIEVWEG EQLIGGLYGL AIGQVFCGES MFHRQTNASK AAIVVLQQHL
IKRGFKLIDA QVMNPHLESL GAKAIKRTHF IELLTQFRDK KVHPDAWIPS EVFLEL
|
|---|
| |