Gene Sputcn32_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2223 
Symbol 
ID5080345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2560993 
End bp2561463 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content46% 
IMG OID640499385 
Product17 kDa surface antigen 
Protein accessionYP_001183743 
Protein GI146293319 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000654513 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAAC CTACTCTAGC AAGCTTTATG TTTATTTTTG CCTTTCTATT AACTCCTGCC 
AATGCAGCCT ACGACCGCAA TCAAGCCGTC CCTGTAGAGA AAGTCCTCTA TGGTGATGTC 
ACCTCTGTGC GCAATATCAC AGAAACTCAG CTTATCGAAG ACAGAAACCA AGGTTGGAAA 
ACCTTTGGTG GTGCATTAGT TGGTGGGGTG ATTGGCCATC AGTTTGGTGG CGGTTCAGGC 
CGCGATGTAG CAACAATTTT AGGCGCTCTT ATCGGCGGCG GTATTGGTAA TCGTTATGGC 
AGTGGTACGA GTGTGCAATC GTTTAAGCTG GTGGAATTGA TGATCAATCA AGAAGATGGC 
ACCCAAGTTA TGGTTATCCA AGATTATGAT CCCGGAATGG TATTTAATGC GGGTGACCGA 
GTGCGAGTCG TATACCTTCA AGGTGGTGTT CGCATTGACT TAGCCATGTA G
 
Protein sequence
MWKPTLASFM FIFAFLLTPA NAAYDRNQAV PVEKVLYGDV TSVRNITETQ LIEDRNQGWK 
TFGGALVGGV IGHQFGGGSG RDVATILGAL IGGGIGNRYG SGTSVQSFKL VELMINQEDG 
TQVMVIQDYD PGMVFNAGDR VRVVYLQGGV RIDLAM