Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2215 |
Symbol | |
ID | 5080337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2552632 |
End bp | 2553669 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499377 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_001183735 |
Protein GI | 146293311 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TGATCCTGAT TGCCAGTTCA ACTCTACTTA CCTTACTGAC ATTAGTTTGT TTAGTGGGTT ACTGGGGTTA TCAAACTATT GTTGATTATA GTAATACACC ACTGAACCTT GTTGAGCCTA AAGAGCTCAC CATTGCACGA GGCACCAGTG TTAACCAACT TGCTCAGCAG TTAGCCGATG ACGGCGTTAT TCAAGACACA TGGAAACTTA AATGGTTACT TAAGTTTCGC CCAGAGCTTG CCAAGATTCG TACAGGCCTT TATGAAATGT CGTCCTCACA AACCGTGATG GACTTACTCA ACGACTTAGT GGCAGGTAAA GTCAAAATCT TCAGCATTAC TTTAGTTGAA GGTAAAACCA TTGCTGAGTG GGAACAACAG CTAGCAAGCG CACCACATTT ACAAGTGACT CCAAAAGTAT TTACTGCAGT ATTAACAGAG CAGGGGGACG ATTCCACTTT GCCAGAAGGT AAATTCTTCC CCGATACCTA CCATTATACT GCCGAGGCGG ATGCTAAAGT CATGCTGACT CAAAGTTATA AAATGATGGA GCAGGAGCTT GCTAAAGCGT GGGCGGAACG GGCGCCGAAT TTGCCGTTAA AATCGCCCTA TGAAATGCTG ATTTTGGCAT CGATAGTCGA AAAGGAAACA GGCCAAGCCC ATGAGCGTGA GCAAATCGCC GGTGTATTTG TTAATCGTCT GAATCTAGGT ATGCGTCTGC AAACCGATCC GACGGTGATT TACGGTATGG GCGATCGCTA TAAGGGCAAT ATTACCCGCA AGGATTTAGT CGAAGAGACA CCTTTTAATA CCTATCGTAT CTTTGGCTTA CCGCCAACAC CGATAGCTGC ACCGAGTAAA GCATCCTTGA TGGCAGTGTC AAAGCCTGCG AGTGTGAGTT ACCTTTATTT TGTATCGCGC AACGATGGCA CCCATGTGTT CTCAACCACA CTAGAAGAAC ACAACCATGC TGTAGACATA TATCAGCGTA AGATAAAACC GGCGCCCCCA GAAAAATCAC CAAAGTAA
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Protein sequence | MKKLILIASS TLLTLLTLVC LVGYWGYQTI VDYSNTPLNL VEPKELTIAR GTSVNQLAQQ LADDGVIQDT WKLKWLLKFR PELAKIRTGL YEMSSSQTVM DLLNDLVAGK VKIFSITLVE GKTIAEWEQQ LASAPHLQVT PKVFTAVLTE QGDDSTLPEG KFFPDTYHYT AEADAKVMLT QSYKMMEQEL AKAWAERAPN LPLKSPYEML ILASIVEKET GQAHEREQIA GVFVNRLNLG MRLQTDPTVI YGMGDRYKGN ITRKDLVEET PFNTYRIFGL PPTPIAAPSK ASLMAVSKPA SVSYLYFVSR NDGTHVFSTT LEEHNHAVDI YQRKIKPAPP EKSPK
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