| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2209 |
|---|
| Symbol | |
|---|
| ID | 5080331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2546597 |
|---|
| End bp | 2547823 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640499371 |
|---|
| Product | nucleoside recognition domain-containing protein |
|---|
| Protein accession | YP_001183729 |
|---|
| Protein GI | 146293305 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.609992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTAATA GGGTGTGGTT AGCTTTCTTT ATCACGGCAC TGTTAGCGAT TGCTGTGCAG
ATATTCAATG GTCATATCGA TGTGCTTTCT ACATCGGTCG AAGCATTATT TGCGAGTGCG
AAACTTGCCG CAGAAATATC CCTCGGTTTG ATTGGAGTGC TTTCTTTATG GATGGGATTG
ATGCGAGTTG GCGAAAAAGC GGGAGTGGTA GGCGCGATCG CCTTTGTATT TGAGCCATTG
TTGCGCCGTT TGATGCCAGA AGTGCCTAAG GGGCATCCTG CCTTTGGCAG TATCACGATG
AATTTAACAG CGAATGTTTT TGGATTAGAT AATGCCGCCA CACCACTTGG GTTAAAAGCG
ATGCATGATT TGCAAAGTTT AAATCCGCAA AAAAGCGTGG CGACCAATGC GCAAATTTTA
TTTTTAGTGC TCAATACTTC CTCTGTGACC TTAGTGCCTG TGACGGTATT TCTCTATCGT
GCCCAACAGG GGGCGACGGC ACCTGCGGAT ATTTTCTTGC CGATTTTATT GGCAACATCG
GCATCGACAC TCGCAGGATT ACTTATCGTG GCATTAGTGC AGCGGATTTC CTTGTTTAAC
GCTGTGGTAC TTGGTTATGG GGCATTACTA CTTTCGGGTT TAGTGGCGAG TGGTTTTTAT
CTGATGACCT TAAGTGCTGA AGCGATAGGT TCAGTATCGA CCGCAATGGG TAATGGTGTA
CTGCTGTTAC TCGTTTTTAC CTTTGTGATT GTCGCAGGGA TCCGTAAAGT GGCTGTTTAT
GATGAGTTTA TCGAAGGTGC CAAGGCTGGA TTTACCCAAT CTATCCAGCT TATTCCCTAT
CTACTAGCCA TGTTGTTAGC GATAGGTCTA TTACGCGTAT CAGGGGCTTT GGACTATTTA
CTACACTTGA TTGCAAGTTG TGTACGGATA TTAGGTTTTG ATACTCGCTT TGTGGATGCG
ATGCCGACGG CATTGATGAA ACCTTTTAGT GGTTCAGGCG CCAGAGCGAT GATGCTTGAG
ACAATGGATC ACCACGGGGT TGATTCCTTT GCAGGCCGAT TATCGGCAAT TTTTCAAGGT
AGTACCGAAA CGACATTTTA TGTTCTAGCC GTGTATTTTG GCTCAGTGGG TATTCGTCAT
GGCCGCCATG CCTTAGCCTG TGGTTTAAGT GCTGATTTTG CAGGTATTAG CGCAGCTATT
GCTGTGTGCT ATTGGTTTTA CGGTTAG
|
|---|
| Protein sequence | MLNRVWLAFF ITALLAIAVQ IFNGHIDVLS TSVEALFASA KLAAEISLGL IGVLSLWMGL
MRVGEKAGVV GAIAFVFEPL LRRLMPEVPK GHPAFGSITM NLTANVFGLD NAATPLGLKA
MHDLQSLNPQ KSVATNAQIL FLVLNTSSVT LVPVTVFLYR AQQGATAPAD IFLPILLATS
ASTLAGLLIV ALVQRISLFN AVVLGYGALL LSGLVASGFY LMTLSAEAIG SVSTAMGNGV
LLLLVFTFVI VAGIRKVAVY DEFIEGAKAG FTQSIQLIPY LLAMLLAIGL LRVSGALDYL
LHLIASCVRI LGFDTRFVDA MPTALMKPFS GSGARAMMLE TMDHHGVDSF AGRLSAIFQG
STETTFYVLA VYFGSVGIRH GRHALACGLS ADFAGISAAI AVCYWFYG
|
|---|
| |