Gene Sputcn32_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2207 
Symbol 
ID5080329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp2543236 
End bp2543868 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content45% 
IMG OID640499369 
Productparaquat-inducible protein A 
Protein accessionYP_001183727 
Protein GI146293303 
COG category[S] Function unknown 
COG ID[COG2995] Uncharacterized paraquat-inducible protein A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.584508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATCG CTAGTATGAA ACAGCAAGGT AAGGATATTG GCCTTTGTCT ATGCCGTGTG 
TGCCAACAAC TCAACACCAC AGGTAGCACT CACTGCCTGC GCTGTGAGGC AGAGTTAAAG 
GTTCGAGATT ACAGTAGCTT GCAAAAAAGT TGGGCGCTAC TCATCACGGC GGCAATTTTA 
TTGGTGCCCG CCAATCTATA CCCAATCACT ATACTGACTA ATCAGGGACA AGTGCGCCAC 
GATACGATTT TTTCAGGGAT CATCCATTTA GTGCACTCAG ATATGATCCC TATCGCCATT 
ATTGTGTTTA TCGCGAGTAT CTTAGTGCCT TGGATTAAAA TCATAGGACT GTCCATTTAC 
CTATGCGCGA TCAGTTTTGA GCTTCCGATT TCAAAAAAGA AGTTAATGGT GGGATTTCAT 
GTTATCGAGT GGATTGGCCG TTGGTCTATG CTTGATTTAT TCGTAATTTC GCTCACTGTT 
GCGCTCGTTA ATATGGGGCA ACTGCTAGAC GCTAAGCCCG CACCTGCAGC CACTGCATTT 
GCATTGGTTA TTTTGTTAAC TCAGCTCGCT GCAAAAGTTT TAGACACTCG TTTACTCTGG 
GATCGATTGG ACACTCAAGA TGACACAAAT TGA
 
Protein sequence
MGIASMKQQG KDIGLCLCRV CQQLNTTGST HCLRCEAELK VRDYSSLQKS WALLITAAIL 
LVPANLYPIT ILTNQGQVRH DTIFSGIIHL VHSDMIPIAI IVFIASILVP WIKIIGLSIY 
LCAISFELPI SKKKLMVGFH VIEWIGRWSM LDLFVISLTV ALVNMGQLLD AKPAPAATAF 
ALVILLTQLA AKVLDTRLLW DRLDTQDDTN