Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2198 |
Symbol | |
ID | 5080320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2531986 |
End bp | 2533350 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499360 |
Product | hypothetical protein |
Protein accession | YP_001183718 |
Protein GI | 146293294 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.394544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAC TGACGATATT GGCGAGTGCA GTCATAATGG CACTTGCAGC GCCTGTTGTA ATGGCGAAAG TCTCAGAGGG TGATGCAGCA AAACTAGGTA ATGAATTAAC GCCATTGGGT GCTGAAAAAG CGGGTAATGC CGATGGCTCT ATTCCGGCGT GGGATGGTGG TATCACGCAA CCTGTTGCAG GCTATACCAA AGGAATGCAT CATCCCGATC CTTTTCCTGA GGATAAAATA GAATTCACCA TTACGAATGC TAACAAAGCA GAATATAAAG ATTTTTTAAC GCCAGGTCAG CTACGGTTAT TTGAACTTTA TCCTGACACA TACAAAATGA ATGTCTACAA GACTCGCCGA AGCGCATCCG TGCCTCAGTT TGTCTATGAT GCCACTAAAG CAAACGCGAC TCGCGCTGAG TTAGTCGCAC AAGGAAATGG CTTGTCAGGT GCATCGATTG GTATTCCATT TCCTATTCCA ACTAATGGGT TAGAGGCTAT TTGGAACCAT ATTTTACGTT TCCGAGGAGT GGATGTTGAG ACGACTCGTA GCCAAGCAGC TCCGACCGCT GATGGGAACT TTACCTTGGT TGAAATGGCT GAAGAGCTTC GTTTTGAATA CTCGCGTCCT GAGATCACCT TAGAACAGTT AAAAGCCAAC AATACCTTAT TCTATTTCAA GCAAGTGGTG ACTCAACCCG CTCGTTTGGC TGGAACAGCC CTCTTGGTTA AAGAAACCAT GGATCAAGAA GCATTGCCAC GCCAAGCTTG GACCTATAAC ACGGGGCAGC GTCGTGTACG TAAGGCACCA AACGTGGCCT TTGATACTCC AGGTACGGTT TCGGACGGTT TACGCACTAC GGATGACTTC GATATGTTTA ACGGCTCTCC AGTGCGTTAT AACTGGGAGT TGATTGGCAA GAAAGAAATT TATATTCCGT ATAATGACTA TAAATTGCAC TCAGACAAGC TGAAATATAA CCAAATTTTA AAAGCGGGTC ATATTAATCC TGAGTATGTT CGTTGGGAAA AACACCGTGT TTGGGAAGTG AAGGCGACAT TAAAACCAGG AATGCGCCAC ATTTATAAAA CCCGTGTGAT GTACCTAGAT GAAGATTCAT GGCAAGTATC AGTTGCCGAT TTATATGATA ACCGTGATGA GTTATACCGT GTCGCCGTTG CCCATGGTTT GAACTATTAC GAAGTACCGA CGCAATGGAA TACTTTAGAG GTTTTCCATG ATTTACAGTC TCGTCGTTAT TTGGTGATGG GCTTAGACAA CCAAAGTGGT ATGTATAACT TTGATGCCAA ATTGAGCGAA GCAAACTTTA CCCCAGACGC CTTACGTCGT GAAGGTATTC GTTAA
|
Protein sequence | MKKLTILASA VIMALAAPVV MAKVSEGDAA KLGNELTPLG AEKAGNADGS IPAWDGGITQ PVAGYTKGMH HPDPFPEDKI EFTITNANKA EYKDFLTPGQ LRLFELYPDT YKMNVYKTRR SASVPQFVYD ATKANATRAE LVAQGNGLSG ASIGIPFPIP TNGLEAIWNH ILRFRGVDVE TTRSQAAPTA DGNFTLVEMA EELRFEYSRP EITLEQLKAN NTLFYFKQVV TQPARLAGTA LLVKETMDQE ALPRQAWTYN TGQRRVRKAP NVAFDTPGTV SDGLRTTDDF DMFNGSPVRY NWELIGKKEI YIPYNDYKLH SDKLKYNQIL KAGHINPEYV RWEKHRVWEV KATLKPGMRH IYKTRVMYLD EDSWQVSVAD LYDNRDELYR VAVAHGLNYY EVPTQWNTLE VFHDLQSRRY LVMGLDNQSG MYNFDAKLSE ANFTPDALRR EGIR
|
| |