Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2186 |
Symbol | |
ID | 5080308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2514628 |
End bp | 2515815 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640499348 |
Product | aromatic amino acid transporter |
Protein accession | YP_001183706 |
Protein GI | 146293282 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.338137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAGA ATAAAATTTT CGGCAGTTTA CTGCTTATCG CCGGCACCAC AATCGGCGCG GGCATGTTGG CTTTGCCTAT CGCATCGGCT GGACTTGGCT TTGGCACTTC CTCCGCCATT ATGCTCATCC TATGGGCGCT GATGGCCTAC ACGGCGCTGC TAATGGTGGA GATCCACCAA TTCGCCCCCA GCGATGCCAG TCTTAATCAC TTAGCGCAGC GCTTATTGGG TCGTAAGGGC CAGTTGATCG CCAATAGCGC CTTGATGTTT TTACTGTACG CCCTCTGCGC CGCCTACATT GCTGGCGGCG GCGAGCAAGT GAACCAAAAA CTGAGCACTT GGCTAGGACT AAATTTGCCA CCGCAGGCGG GTGCAATCCT ATTCACCTTG CTGGTTGGCG CCATTGTGGG CATGGGAACC CACTGTGTGG ATCTCATCAA TCGCGGTTTA TTTGCCCTTA AGCTATTGGC ATTATTGCTT ATGTTGGCCT TGTTACTGCC GCAGGTTGAA AGCCCACATT TGCTCGAACT CCCGCTCAAC CAAGGCCTAA TTATCACGGC TATCCCGGTA ATTTTTACCT CCTTTGGTTT CCACGGTTCG ATTCCCTCAG TGGTGCGCTA CTTGGGCGTT GAGGTCAAAG CCCTGCGCAG GATCATGTTG TTTGGCTCAG CTTTGCCATT AGTGATTTAC CTTTTGTGGC AACTGGGCAG TCAAGGCGTA TTGAGCCAAA GTCAATTGCT CGAAAACCAG AGTTTATCGA GCTTTATCAA TCAACTGGCG AGCGTACTGC ACAGTGAATA CTTAAGTAGC GCTATTAGTC TATTTGCCGA CCTAGCACTT GCGACTTCGT TTTTAGGGGT GAGTTTAGGT TTGTTCGATT TTATGGCCTC AAGCTTAAGG CAAGAAGATA ATGCAACAGG TCGCAGCTTA ACCGCGGCTA TCACCTTTTT ACCGCCCTTA GGTTTTGCCC TCTTCTACCC TCAAGGTTTT ATCACAGCGC TGGGTTACGC GGCGATTGCG CTGGTGATCC TCGCCATCTT TTTACCTGTG GCCATGGTGT GGGTGCAACG ACAGATGCGA GACGCTGCCA ATATGCCGAC GGGTTACCGC GTTGCGGGTG GCAAGTTAGC CTTAATACTC GCCACACTTT GCGGAATTGT GGTGATCGCC GCCCAGATAT TTAGCTAG
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Protein sequence | MTQNKIFGSL LLIAGTTIGA GMLALPIASA GLGFGTSSAI MLILWALMAY TALLMVEIHQ FAPSDASLNH LAQRLLGRKG QLIANSALMF LLYALCAAYI AGGGEQVNQK LSTWLGLNLP PQAGAILFTL LVGAIVGMGT HCVDLINRGL FALKLLALLL MLALLLPQVE SPHLLELPLN QGLIITAIPV IFTSFGFHGS IPSVVRYLGV EVKALRRIML FGSALPLVIY LLWQLGSQGV LSQSQLLENQ SLSSFINQLA SVLHSEYLSS AISLFADLAL ATSFLGVSLG LFDFMASSLR QEDNATGRSL TAAITFLPPL GFALFYPQGF ITALGYAAIA LVILAIFLPV AMVWVQRQMR DAANMPTGYR VAGGKLALIL ATLCGIVVIA AQIFS
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