| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2170 |
|---|
| Symbol | |
|---|
| ID | 5080046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2496353 |
|---|
| End bp | 2497381 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640499332 |
|---|
| Product | beta-hexosaminidase |
|---|
| Protein accession | YP_001183690 |
|---|
| Protein GI | 146293266 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTATT TGATGTTGGA TTTGCTGTCT GTAGATGTCA GTGAGGCAGA AGCTGAAATG
TTACGCCATC CACAGGTGGG TGGTTTAATT TTATTTTCCC GTAATTTTTC GAGTCGTGAT
CAGTTAATCC GTCTGGTACA ACAGATACGC CAAATTCGCC CAGAAATTCT GATCGCGGTC
GATCATGAAG GTGGTCGGGT GCAGCGTTTT CGAGATGGGT TTACCCTTAT TCCTGCAATG
GGGGATATTT TACCCGCGGC GAAAGGTGAT ATGACGTTAG CTAAGCGTTG GGCCTGTGAG
TTAGGATTTT TAATGGCAAT AGAATTGCTG GCCTGTGATA TCGATTTAAG CTTTGCACCT
GTACTTGATC TTAATGGCAT TAGTGAAGTT ATCGGTAAAC GAAGCTTTAG TGCGGATCCT
AGCGAGGTTA TCGCACTGGC AGATAGTTTT ATTGACGGGA TGGCTCAGGC GGGAATGGGC
GCAGTAGGTA AACATTTTCC CGGCCATGGC AGTGTGGCGG CGGATTCTCA TATTGCCCAG
CCTATTGATG AGCGTTATGC GAAGGCCATA TTTGCTAAGG ATATTTTGCC ATTTAAGGAA
TTGATTGCTA AGGGGAAATT ATCGGGCATT ATGCCTGCCC ATGTGATTTA TTCTAAAGTC
GATCCTCATC CAGCGGGATT TTCACATTAT TGGCTTAAGC AAGTGTTGCG TCAGGAACTT
GGTTTTACTG GGGTGATTTT CTCCGATGAT TTAGGGATGA AGGGCGCTGC ATTTGCAGGG
GATTATCGCG CTCGAGCCCA AGCTGCCCTT GATGCAGGGT GCGATATGAT CTTAGTCTGT
AATGATAATC CGGGTGTTAT GTCGTTGCTT GATGGCTTTA GTTGGCCTGA AAATGCACCG
TTACATCCTG CAAGTTTGTT AAAACCCAAT GTTAATCAAA CTTCACTGGC ACTAGAAAAT
CTGGCTCGTT GGGAAAATGC AAAACAATTG GCGGAACAAA TTTGTTTGGC ACAAAAGGCA
AAAGTTTGA
|
|---|
| Protein sequence | MSYLMLDLLS VDVSEAEAEM LRHPQVGGLI LFSRNFSSRD QLIRLVQQIR QIRPEILIAV
DHEGGRVQRF RDGFTLIPAM GDILPAAKGD MTLAKRWACE LGFLMAIELL ACDIDLSFAP
VLDLNGISEV IGKRSFSADP SEVIALADSF IDGMAQAGMG AVGKHFPGHG SVAADSHIAQ
PIDERYAKAI FAKDILPFKE LIAKGKLSGI MPAHVIYSKV DPHPAGFSHY WLKQVLRQEL
GFTGVIFSDD LGMKGAAFAG DYRARAQAAL DAGCDMILVC NDNPGVMSLL DGFSWPENAP
LHPASLLKPN VNQTSLALEN LARWENAKQL AEQICLAQKA KV
|
|---|
| |