Gene Sputcn32_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2164 
Symbol 
ID5080040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp2483589 
End bp2484185 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content45% 
IMG OID640499326 
Productphage integrase family protein 
Protein accessionYP_001183684 
Protein GI146293260 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCTT GGAATAAAGG TCATCCCATG GGCCAAAAAA GACCTTTTAA ATTGGAAGAG 
ATTTGGCGCA TTCGTACTCG TTTGGAGTTA GAGCATAATA TTGCAGAGTT AGCGTTACTT 
AATTTAGCGA TTGATTCAAA ATTGCGCGCT TGTGACTTAC TGCATTTGAA AGTTCAAGAC 
ATTACCTCAG CAGGCATCAT CAATCCGCGC GTGCGCTTAA CACAACGTAA AACTCACCGT 
GAAGTGCAGT TTGAAATTAC GCCACCAACC CAACATTGTC TGACCTCTTG GTTACTTGAA 
AAGCGACTCA TCGCAGAGGA TTACTTATTT CCCAGCCCAA GGTGTGCTCA TCAACCGATG 
AGTTACAGCT ATTACCGCGC GATAGTCAAA AACTGGGCGC GTCAGTTAGG CCAAAATAGT 
GAGTTGTACG GCACACATTC ACTGCGCCGA ACCAAAGCCA CGCTGATTTA CCGCAGGACG 
AAAGATATTC GAGCCATTCA AATTTTGCTT GGTCATGTCA AGTTAGATAA CACCGTCCGC 
TACTTAGGTG TTGAGATTGA AGATGCACTG CGCATATCGG AATCCATTGA GGTGTAA
 
Protein sequence
MDAWNKGHPM GQKRPFKLEE IWRIRTRLEL EHNIAELALL NLAIDSKLRA CDLLHLKVQD 
ITSAGIINPR VRLTQRKTHR EVQFEITPPT QHCLTSWLLE KRLIAEDYLF PSPRCAHQPM 
SYSYYRAIVK NWARQLGQNS ELYGTHSLRR TKATLIYRRT KDIRAIQILL GHVKLDNTVR 
YLGVEIEDAL RISESIEV