Gene Sputcn32_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2161 
Symbol 
ID5080037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2479016 
End bp2480716 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content45% 
IMG OID640499323 
Producthypothetical protein 
Protein accessionYP_001183681 
Protein GI146293257 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTCT TATTAGTATT ATCAGTACTC TTGATGTCAT TTAATCTGTC AGCGGAGCGG 
ATCTTACTCG ACGAACTATG GCGGGTTAGC GATGTGCCGG GCGAAGCTAT CTATTATCAG
GAGCAAGCGG CAACAGAGCA AAATGGCGTG TTGCCAGTGC AGCTATTTTA TCTGGAGACG
GATAAGCCGG TTTTTAAGGG TAGCGTTAAA GGACCTAATT TAGCCGAGAG TTATCTTGTC
GGTGATTTCG AGTTCTTCTA TCCCGACGGT CAACTGTCTC GCAAAGGCAG TGGCGATGCA
CAAGGGCGTT ATCAGGGAAC ACATTTGCAT TACTGGGAAG ATGGAACGCT CTCGGGAGAG
TACCACTACC TGAATGGTCA GTTGCATGGT GAGCAGAAAA GTTACCATAC CAATGGCCAA
TTACGAGATC ATCAGCATCG CGTGAACGGG GCTGAATTAG GTTTATCGCA AAGTTATTTT
GACAATGGCC AGTTGCAAAC ACGGGTAACC TATGGTGTTA ACAGTATGGA AGGGCTTTAT
GAAAGCTTTC ATTCCAATGG TCAGCCAGAA CAAACCGTGA ATATGGTGGC GGGAAAAAGA
GAAGGTGAGC GACTGTATTG GACAAAGGAA GGCTGGTTAT TCACCAAAGA GTTTTACATT
AAGGGGAAAT TACACGGTGA AGTGTTGATT TATCAGGCCG CAGATGTGCT ACGAGAAATT
AAACACTATC AGCATGATAA GCAGGTGGGA AACCAGCAGC GTTTTGATCA ACTAGGGCAG
TTAGCAGCGC AACAATTGTA CGATAAGGAT GGCCGTGAAA TTCAAAATAT TACCTACGAT
GATACTGGTA AAGTAGTAAG CCAGAACGAC ACGCAATACC TCGCTAAAGG TCGGATGACT
ACTGAAAAAC GCTTCGATGC AACAGGGGTA TTAACCTATC AATATCAGTA TGATACTGTC
AAAGATTGGA GCCTACGTCA GCGTTTTACT GCAACCGGTG AATTGATTGG GCGCGAAGAA
CAACTCGAGG GGCACTACGA AGGTTTGTAT ATCGGTGATG GCTGGAATGG CTATATCAGA
CGAATAAACT ACCGCAAAGG TAAAATGCAC GGTGCATATC GCGAAGATAA TGCCGTAGTT
GGTGGGTTTG TCACTGGGCA ATATCACTTA GGCGTAAAGG TTGGTAAGTG GGTGACCAAA
AACGCTGATA CGACCCGTAA TGAGCAGTTT AACCAACAAG GCCAGCTTAA TGGTGAACAG
AGCGAAATCG CCACAGACGG CACGGTAATG CATCAAGCGT TTTATAAAAA CGAAAAGTTA
CATGGCGCGT ATCTACAGCG TGGCTTTGAT AAACAATTGC AGGCCCAAGG TCAATATGTT
AATGGTCAGC GCGAAGGCCA ATGGCTGCTG CAAGATGAAA GCAGCTACAG CATGGTTAAG
CTATGGCATG GCAACTATAA GGCAGGACAC GAAGTAGGGA ACTGGCAGGC CTTTTCCGCT
AACGGCCATT TATTAGGGCA GATGCAATAT GATAAGAAAG GTCAATTGCA AGGTAAAAGC
TACAGCTTTA ACGAAGATGG TAGCCTACTG CAAAGTGATG AGTATCTTGA TAATCAACTG
CACGGCAGGT TGGTGTACTA CGTTAATGGT GAACCGTCAT CCGAATATCG TTATCAAAAT
GGTCAGATGA TAAGCGAGTA G
 
Protein sequence
MRVLLVLSVL LMSFNLSAER ILLDELWRVS DVPGEAIYYQ EQAATEQNGV LPVQLFYLET 
DKPVFKGSVK GPNLAESYLV GDFEFFYPDG QLSRKGSGDA QGRYQGTHLH YWEDGTLSGE
YHYLNGQLHG EQKSYHTNGQ LRDHQHRVNG AELGLSQSYF DNGQLQTRVT YGVNSMEGLY
ESFHSNGQPE QTVNMVAGKR EGERLYWTKE GWLFTKEFYI KGKLHGEVLI YQAADVLREI
KHYQHDKQVG NQQRFDQLGQ LAAQQLYDKD GREIQNITYD DTGKVVSQND TQYLAKGRMT
TEKRFDATGV LTYQYQYDTV KDWSLRQRFT ATGELIGREE QLEGHYEGLY IGDGWNGYIR
RINYRKGKMH GAYREDNAVV GGFVTGQYHL GVKVGKWVTK NADTTRNEQF NQQGQLNGEQ
SEIATDGTVM HQAFYKNEKL HGAYLQRGFD KQLQAQGQYV NGQREGQWLL QDESSYSMVK
LWHGNYKAGH EVGNWQAFSA NGHLLGQMQY DKKGQLQGKS YSFNEDGSLL QSDEYLDNQL
HGRLVYYVNG EPSSEYRYQN GQMISE