Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2161 |
Symbol | |
ID | 5080037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2479016 |
End bp | 2480716 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499323 |
Product | hypothetical protein |
Protein accession | YP_001183681 |
Protein GI | 146293257 |
COG category | [S] Function unknown |
COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTCT TATTAGTATT ATCAGTACTC TTGATGTCAT TTAATCTGTC AGCGGAGCGG ATCTTACTCG ACGAACTATG GCGGGTTAGC GATGTGCCGG GCGAAGCTAT CTATTATCAG GAGCAAGCGG CAACAGAGCA AAATGGCGTG TTGCCAGTGC AGCTATTTTA TCTGGAGACG GATAAGCCGG TTTTTAAGGG TAGCGTTAAA GGACCTAATT TAGCCGAGAG TTATCTTGTC GGTGATTTCG AGTTCTTCTA TCCCGACGGT CAACTGTCTC GCAAAGGCAG TGGCGATGCA CAAGGGCGTT ATCAGGGAAC ACATTTGCAT TACTGGGAAG ATGGAACGCT CTCGGGAGAG TACCACTACC TGAATGGTCA GTTGCATGGT GAGCAGAAAA GTTACCATAC CAATGGCCAA TTACGAGATC ATCAGCATCG CGTGAACGGG GCTGAATTAG GTTTATCGCA AAGTTATTTT GACAATGGCC AGTTGCAAAC ACGGGTAACC TATGGTGTTA ACAGTATGGA AGGGCTTTAT GAAAGCTTTC ATTCCAATGG TCAGCCAGAA CAAACCGTGA ATATGGTGGC GGGAAAAAGA GAAGGTGAGC GACTGTATTG GACAAAGGAA GGCTGGTTAT TCACCAAAGA GTTTTACATT AAGGGGAAAT TACACGGTGA AGTGTTGATT TATCAGGCCG CAGATGTGCT ACGAGAAATT AAACACTATC AGCATGATAA GCAGGTGGGA AACCAGCAGC GTTTTGATCA ACTAGGGCAG TTAGCAGCGC AACAATTGTA CGATAAGGAT GGCCGTGAAA TTCAAAATAT TACCTACGAT GATACTGGTA AAGTAGTAAG CCAGAACGAC ACGCAATACC TCGCTAAAGG TCGGATGACT ACTGAAAAAC GCTTCGATGC AACAGGGGTA TTAACCTATC AATATCAGTA TGATACTGTC AAAGATTGGA GCCTACGTCA GCGTTTTACT GCAACCGGTG AATTGATTGG GCGCGAAGAA CAACTCGAGG GGCACTACGA AGGTTTGTAT ATCGGTGATG GCTGGAATGG CTATATCAGA CGAATAAACT ACCGCAAAGG TAAAATGCAC GGTGCATATC GCGAAGATAA TGCCGTAGTT GGTGGGTTTG TCACTGGGCA ATATCACTTA GGCGTAAAGG TTGGTAAGTG GGTGACCAAA AACGCTGATA CGACCCGTAA TGAGCAGTTT AACCAACAAG GCCAGCTTAA TGGTGAACAG AGCGAAATCG CCACAGACGG CACGGTAATG CATCAAGCGT TTTATAAAAA CGAAAAGTTA CATGGCGCGT ATCTACAGCG TGGCTTTGAT AAACAATTGC AGGCCCAAGG TCAATATGTT AATGGTCAGC GCGAAGGCCA ATGGCTGCTG CAAGATGAAA GCAGCTACAG CATGGTTAAG CTATGGCATG GCAACTATAA GGCAGGACAC GAAGTAGGGA ACTGGCAGGC CTTTTCCGCT AACGGCCATT TATTAGGGCA GATGCAATAT GATAAGAAAG GTCAATTGCA AGGTAAAAGC TACAGCTTTA ACGAAGATGG TAGCCTACTG CAAAGTGATG AGTATCTTGA TAATCAACTG CACGGCAGGT TGGTGTACTA CGTTAATGGT GAACCGTCAT CCGAATATCG TTATCAAAAT GGTCAGATGA TAAGCGAGTA G
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Protein sequence | MRVLLVLSVL LMSFNLSAER ILLDELWRVS DVPGEAIYYQ EQAATEQNGV LPVQLFYLET DKPVFKGSVK GPNLAESYLV GDFEFFYPDG QLSRKGSGDA QGRYQGTHLH YWEDGTLSGE YHYLNGQLHG EQKSYHTNGQ LRDHQHRVNG AELGLSQSYF DNGQLQTRVT YGVNSMEGLY ESFHSNGQPE QTVNMVAGKR EGERLYWTKE GWLFTKEFYI KGKLHGEVLI YQAADVLREI KHYQHDKQVG NQQRFDQLGQ LAAQQLYDKD GREIQNITYD DTGKVVSQND TQYLAKGRMT TEKRFDATGV LTYQYQYDTV KDWSLRQRFT ATGELIGREE QLEGHYEGLY IGDGWNGYIR RINYRKGKMH GAYREDNAVV GGFVTGQYHL GVKVGKWVTK NADTTRNEQF NQQGQLNGEQ SEIATDGTVM HQAFYKNEKL HGAYLQRGFD KQLQAQGQYV NGQREGQWLL QDESSYSMVK LWHGNYKAGH EVGNWQAFSA NGHLLGQMQY DKKGQLQGKS YSFNEDGSLL QSDEYLDNQL HGRLVYYVNG EPSSEYRYQN GQMISE
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