| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2156 |
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| Symbol | |
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| ID | 5080032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2471502 |
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| End bp | 2472734 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499318 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001183676 |
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| Protein GI | 146293252 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.550163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAG GAATTCCTTT CTACGTTGGT TACCGCTATT GGCGGGCCAG AAAAGCAAAC
GCGTTTGCCT CGTTTATTAC TTTATTTGCA GTGTCGGGCA TTTTTTTAGG CGTTGCCGCC
TTAATTGTGG TCAGTTCTGT GATGAATGGT CTCGAAGGTC AACTTAAACA ACGCATCCTT
GGCGCAGTGC CGCAGCTCAC GGTTTATACC AGTACGCCCT TAAACGATTG GACTGAACAG
GCGAATGTGC TTAAGGCTTT GCCTGGTGTG CAAGGTGTCA CACCCAGTGT TTCAACCCAA
GCTATGGTGC AATCGGCGGC TAATATTCGC GCCGTGCAAG TGTTTGGGGT ATTTCCCGAG
CTTGCAGCAA AGCTTTCGGT TATTGCACAG CACACCTATT CAGGTGCATT TGATGAACTT
GTCGCGGGTC AATATAAGAT CATTTTGGGC TCCGAGTTGG CGCGCCAACT TAAAGTGAAT
CCAGGTGATA CGGTTCGATT ATTAAGTGGT GATGGGGTGG TGTATTCGCC CTTTGGGCCA
GTACCTAGCC AACGTAAATT TTTGGTTTCA GGCATATTTG AAATGGGCTC TCAAGTCGAT
GCTGGCGTGG CTTATATTCA CTATCAAGAT GCTAAGCGAT TAATGCGTCA GCCCAGCGAA
GCAATCGATC AACTTCGGCT TTATCTTGAT GATCCCTTTA GTGCACCGGC GTTATCGCCT
AAGGTGCAAG ATATCTTACT TAAGCAACAT ATCGAGGCAA CAACCAGCGA TTGGCGCGAT
ACCTACGGGC ACTTATTTGG CGCAGTGAAA ATGGAAAAAA ACATGATGTC ACTGATGCTC
AGTCTGATTG TTGCCGTGGC AGCCTTTAAC ATTGTTTCGG CATTAGTGAT GATGGTGGTG
GATAAAACGA CGGATGTAGC TGTGCTGAAA ACCCAAGGCC TAACTACCCC CGCTGTAATG
GGCATATTTA TTGTGCAAGG CTCGCTCAAT GCCATATTAG GTTTAGTGCT GGGGTTAGGG
GTTGGCATTC TCCTCACGCT TAATTTGAAT GGGATTATGT CTACCCTTGG CATTTCTATT
TTAGGTGCTG GACAAGTGCT ACCCGTCAAA CTTGAGTTGA CGCAACTGTC TGTTATTGTG
GTGGGTACTT TACTCGTGAC GTTACTCGCG ACCTTATATC CCGCATTGCG TGCAGCCAGA
GTGCAACCTG CTACTGCACT AAGATATGAA TAA
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| Protein sequence | MNLGIPFYVG YRYWRARKAN AFASFITLFA VSGIFLGVAA LIVVSSVMNG LEGQLKQRIL
GAVPQLTVYT STPLNDWTEQ ANVLKALPGV QGVTPSVSTQ AMVQSAANIR AVQVFGVFPE
LAAKLSVIAQ HTYSGAFDEL VAGQYKIILG SELARQLKVN PGDTVRLLSG DGVVYSPFGP
VPSQRKFLVS GIFEMGSQVD AGVAYIHYQD AKRLMRQPSE AIDQLRLYLD DPFSAPALSP
KVQDILLKQH IEATTSDWRD TYGHLFGAVK MEKNMMSLML SLIVAVAAFN IVSALVMMVV
DKTTDVAVLK TQGLTTPAVM GIFIVQGSLN AILGLVLGLG VGILLTLNLN GIMSTLGISI
LGAGQVLPVK LELTQLSVIV VGTLLVTLLA TLYPALRAAR VQPATALRYE
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