| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2155 |
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| Symbol | |
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| ID | 5080031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2470725 |
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| End bp | 2471420 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499317 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_001183675 |
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| Protein GI | 146293251 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.263413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACG TGTTACTGCA AGTGCAGAAT GTCAGTAAGA GTTACCATGA TGGTGCGGTG
ACTACGCAAG TATTGTCCAA TGTGGATCTG CAGGTCTTTA AAGGCGAACA GTTAGCCATT
GTCGGTAGCT CTGGTTCGGG TAAGAGTACC TTATTGCATA TTATGGGAAC TTTGGATGAG
CCAACGGCGG GTAAAGTTTT GCTGTTAGGC GAAGATTTAT ATCAAGTATC CAGTGCTCGC
CAAGCGCAGA TCCGCAATCA AGATTTAGGC TTTATTTATC AATTTCACCA TTTATTGCCT
GAATTTACCG CGCTAGAAAA TGTGGCAATG CCCGCATTTA TTCAAGGGAA AGATCGTAAG
CAAGCGATTG CCGATGCAAA ACTGCTACTT GAGCGGGTGG GGCTGGGTCA CCGCATAACG
CATATTCCCG CCGAATTATC GGGCGGCGAA CGTCAACGAG TAGCCATTGC GCGGGCGTTA
ATCAATCAAC CTAAATTGGT GCTTGCCGAT GAACCAACGG GTAATCTTGA TGCAAATAGT
GGTGATGCCG TATATGAGCT TATTCGCGAG TTAGCAAATC AACTCGGTAC AGCCTTTGTG
GTGGTAACCC ATGATCATAA ATTAGCCGCT CGCATGGATA GGCAATTGAT GATGAAAAAC
GGTTATTTGC AAGTCGCGGC GGAAACCCAA GTATGA
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| Protein sequence | MQDVLLQVQN VSKSYHDGAV TTQVLSNVDL QVFKGEQLAI VGSSGSGKST LLHIMGTLDE
PTAGKVLLLG EDLYQVSSAR QAQIRNQDLG FIYQFHHLLP EFTALENVAM PAFIQGKDRK
QAIADAKLLL ERVGLGHRIT HIPAELSGGE RQRVAIARAL INQPKLVLAD EPTGNLDANS
GDAVYELIRE LANQLGTAFV VVTHDHKLAA RMDRQLMMKN GYLQVAAETQ V
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