Gene Sputcn32_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2152 
Symbol 
ID5080028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2467692 
End bp2468417 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content46% 
IMG OID640499314 
ProductRNA methyltransferase 
Protein accessionYP_001183672 
Protein GI146293248 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0159142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAGTA ATATTCGTGT GGTTTTAGTG GGGACATCGC ACCCCGGCAA TATAGGTTCC 
ACCGCCAGAG CGATGAAAAC AATGGGTCTG TCTACGCTAT ATCTTGCCGA ACCTCGCGTA
GAACCCGATG GTCAATCTAT TGCGCTTGCC GCGGGTGCTT CTGATATTTT GAAACACCTC
GTTAAAGTCG ACTCACTCGC CGAAGCCATT GCCGATTGTA GTCTGGTCAT TGCCACCAGT
GCGCGCAGCA GAACCTTAGA TTGGCCTATG CTTGAACCAC GCGAAGCAGG GCAGAAACTG
GTTACAGAAA GCGTAACTGG CCCTGTTGCC ATTGTTTTTG GCCGTGAAAA TCATGGGCTC
AGCAATGAAG AGTTGCAACA ATGTACTTAT CATGTGGCGA TCCCTGCAAA TCCTGAGTAC
AGCTCACTTA ACCTCGCTCA AGCGGTACAA ATTATTTGTT ATGAAACCCG CGTTGCACAC
TTAGCTGGAA TTGAATCTGC ACAAGAGCCG ACAGAATATC CATTGGCAGC CGATCAAGAG
CGTTTTTTTG TACACCTTGA AAATACGTTA TTTTCTACGG GCTTTATTAT TAAAAACCAC
CCTGGACAAG TGATGACTAA ATTGCGCCGT TTGTTCAGTC GTGCACGGAT TGAAAGCCAG
GAAATGAATA TTCTTAGAGG GATCCTGACT TCCATCGATA AAGTGGTTAG CAATAAACAA
AAATAG
 
Protein sequence
MLSNIRVVLV GTSHPGNIGS TARAMKTMGL STLYLAEPRV EPDGQSIALA AGASDILKHL 
VKVDSLAEAI ADCSLVIATS ARSRTLDWPM LEPREAGQKL VTESVTGPVA IVFGRENHGL
SNEELQQCTY HVAIPANPEY SSLNLAQAVQ IICYETRVAH LAGIESAQEP TEYPLAADQE
RFFVHLENTL FSTGFIIKNH PGQVMTKLRR LFSRARIESQ EMNILRGILT SIDKVVSNKQ
K