| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2149 |
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| Symbol | |
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| ID | 5080025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2464727 |
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| End bp | 2465941 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499311 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001183669 |
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| Protein GI | 146293245 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00291634 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTC CTATCTATTT AGATTATGCC GCCACCACGC CTGTCGATCC GAGAGTCGCG
GAAAAGATGT TCCAATATAT GACGATGGAT GGCATCTTTG GCAACCCAGC CTCTCGTTCA
CATCGCTACG GCTGGCAAGC TGAAGAAGCG GTGGATATTG CTCGCAATCA AGTGGCTGAT
TTGATCAATG CCGATCACCG TGAAATTGTG TTTACCTCTG GCGCGACTGA GTCAAATAAC
TTAGCCATCA AAGGTGTTGC TCATTTCTAT AACAAGAAAG GCAAGCATAT CATTACCAGC
AAGACTGAAC ACAAAGCTGT ACTCGATACC TGCCGTCAAC TAGAACGTGA AGGCTTTGAA
GTCACCTATT TAGAGCCCGC ATCTAACGGC ATTATTCCGA TGGAACGTTT AGAAGCTGCG
ATGCGTGACG ACACTATTCT TGTTAGCATC ATGCACGTCA ACAATGAAAT CGGTGTGATC
CACGATATCG ATGCAATTGG TGAGTTATGC CGCTCAAAAG GCATCATTTT CCATATGGAT
GCAGCACAAA GTGCAGGCAA ATTGCCAATT GATGTGCAAG CCACAAAGGT CGATCTTATT
TCAATCTCTG GTCATAAAAT GTATGGCCCT AAAGGCATTG GTGCCCTTTA TGTTCGCCGT
AAACCTCGTA TTCGCTTAGA AGCGCAAATG CATGGTGGTG GACACGAACG TGGTATGCGC
AGTGGCACAT TACCGACTCA CCAAATAGTC GGTTTAGGTG AAGCTGCCGC GATCGCTAAA
GCGGAAATGG CAACAGATAA CGAACGTATT GGTCGTTTGC GCGATAAATT ATGGAATGGC
ATCAAACATA TTGAAGAGAC GTATATTAAC GGTGATCTAA CTCAACGTTT TTGCGGTAGC
CTCAATGTCA GCTTCAACTA TGTTGAAGGT GAGTCTTTGA TGATGGCCTT AAAAGATTTA
GCTGTTTCAT CGGGTTCGGC TTGTACTTCA GCCAGCCTTG AACCGAGCTA CGTATTACGT
GCACTGGGTT TAAATGATGA AATGGCACAT AGCTCAATTC GTTTCTCCAT TGGCCGTTTC
ACAACGGAAG AAGAAATCGA TCATGCTATC GAAACTATTA CACAATCTAT TGATAAATTA
AGAGAAATGT CCCCGTTATG GGAAATGTTT AAAGATGGTA TCGACCTGAA CCAAGTTCAG
TGGGCACATC ATTAG
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| Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMFQYMTMD GIFGNPASRS HRYGWQAEEA VDIARNQVAD
LINADHREIV FTSGATESNN LAIKGVAHFY NKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLEPASNG IIPMERLEAA MRDDTILVSI MHVNNEIGVI HDIDAIGELC RSKGIIFHMD
AAQSAGKLPI DVQATKVDLI SISGHKMYGP KGIGALYVRR KPRIRLEAQM HGGGHERGMR
SGTLPTHQIV GLGEAAAIAK AEMATDNERI GRLRDKLWNG IKHIEETYIN GDLTQRFCGS
LNVSFNYVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF
TTEEEIDHAI ETITQSIDKL REMSPLWEMF KDGIDLNQVQ WAHH
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