| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2148 |
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| Symbol | |
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| ID | 5080024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2464305 |
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| End bp | 2464688 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499310 |
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| Product | scaffold protein |
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| Protein accession | YP_001183668 |
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| Protein GI | 146293244 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
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| TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00245787 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTACA GTGAAAAAGT GATAGATCAT TATGAGAACC CACGTAATGT AGGTTCCTTT
GATAAAAACG ATCCTTCGGT CGTGACCGGT ATGGTAGGCG CGCCTGCTTG CGGTGACGTG
ATGAAACTTC AGTTGAAAAT TGGTGCTGAT GGCATCATTC AAGACGCTAA GTTCAAAACC
TACGGTTGTG GTAGTGCCAT TGCCTCTAGT TCACTGGTAA CTGAGTGGGT CAAGGGTAAA
ACGATTGAAC AAGCCGCAGC GATTAAAAAT ACTGATATCG CTGAGGAACT TGCGTTACCT
CCAGTGAAAA TTCACTGCTC AATTTTGGCA GAAGATGCCA TTAAAGCCGC TATTGATGAG
TATAAATCGA AGCAAGCTCA GTAG
|
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| Protein sequence | MAYSEKVIDH YENPRNVGSF DKNDPSVVTG MVGAPACGDV MKLQLKIGAD GIIQDAKFKT
YGCGSAIASS SLVTEWVKGK TIEQAAAIKN TDIAEELALP PVKIHCSILA EDAIKAAIDE
YKSKQAQ
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