Gene Sputcn32_2145 details

Gene Information

• Locus tag: Sputcn32_2145
• Symbol: hscA
• ID: 5080021
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: -
• Start bp: 2461496
• End bp: 2463358
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640499307
• Product: chaperone protein HscA
• Protein accession: YP_001183665
• Protein GI: 146293241
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000851094
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCTTT TGCAGATAGC TGAGCCCGGT CAAAGTGCCG CGCCACACCA ACATAGACTT 
GCCGTTGGTA TCGATTTAGG TACGACCAAT TCGTTGGTTG CAGCAGTTCG AAGTGGAGAA 
ACGGCAACCT TGCCGGACGA AGATGGACAA CATTCTTTAC CCTCCATTGT CCGTTATACC 
CAAGACACTG TTGAAGTTGG TGCGCTTGCA GCATTAAGCT CAGCCCAAGA TCCAAAGAAC 
ACGATAGTAT CGGTAAAGCG TTTTATGGGG CGTAGTCTGA CCGATATTCA AACGGGTGAA 
CAGTCCTTTC CCTATGAGTT TGCCGAAAGT GAAAATGGGT TACCTTTATT TGTCACTCCC 
CAAGGCCTCG TCAATCCAGT GCAAGTCTCA GCTGAGATTT TGCGACCACT TATTGCCCGA 
GCAGAAAAAA CCTTAGGCGG CGAACTCCAA GGTGTGGTAA TCACAGTTCC CGCCTATTTC 
GATGATGCCC AACGTCAAGG CACTAAAGAT GCTGCGGCAT TGTTGGGTGT TAAAGTCTTG 
CGTTTGCTCA ATGAGCCAAC CGCAGCCGCG ATTGCCTATG GTTTAGACTC TAAGCAAGAG 
GGGGTGATTG CCATTTTCGA TTTAGGTGGT GGTACCTTTG ATATTTCAGT TTTACGTTTA 
AATCGTGGCG TATTTGAAGT ATTGGCAACA GGGGGAGATT CGGCTCTTGG TGGTGATGAT 
TTCGATCATT TGCTACAGGA ACATATGCAG CAAGTTTGGC TGCTTGGTGA CATCGATGTT 
CAGTTACGTC GTCAATTATT GATTGAGGCT CGCCGGGTTA AAGAAGCGTT AACCGATGCC 
AATGAAACCG AAGCTAGAAT CATCCTTGCC GATGGTTCTG AACTTAAGCA AGTTGTCACA 
AAACGTGACT TTGATAGTTT GATTAGCCCA TTAGTGAAAA AAACTATCGC CAGTTGCCGC 
AGAACTCTAC GTGATGCTGG CGTCACAGCA GAAGAAGTGC TTGAAACTGT GATGGTTGGC 
GGTTCAACGC GCGTGCCATT AGTGCGTGAA CAGGTCGAAG CTTTTTTCGG CAAACCACCG 
CTGACATCTA TCGATCCCGA TCGTGTTGTC GCCATTGGCG CTGCAATTCA AGCTGACATT 
TTAGTGGGTA ACAAACCCGA ATCGGATTTG TTATTGCTCG ATGTGATCCC TTTGTCGTTA 
GGCATAGAGA CCATGGGCGG CTTAGTGGAA AAAGTGGTTT CGCGTAATAC CACGATTCCG 
GTTGCACGGG CGCAGGAATT TACCACCTTT AAAGATGGTC AAACGGCCAT GGCATTCCAT 
GTGGTGCAGG GGGAGCGTGA GCTGGTCGCT GATTGCCGTT CACTCGCGCG TTTTACCTTG 
AAAGGTATTC CGCCTTTAGC CGCAGGTGCT GCGCACATTC GGGTGACCTT CCAAGTGGAT 
GCCGATGGTT TACTCAGCGT GACCGCGATG GAAAAATCCA CGGGGGTGCA ATCGAGCATT 
CAAGTAAAAC CATCTTTTGG TTTATCAGAT ACTGAAATTG CGACTATGTT GAAAGATTCG 
ATGAAGTACG CAAAAGATGA TATAAGCCGC CGTATGCTTG CCGAGCAGCA AGTCGAAGCT 
GCAAGGGTGC TCGAATCTTT ACATGCCGCG TTAGCGAAAG ATGGCGATTT GCTAAATGAT 
GATGAGCGTG GGCAGATCGA TGCCACTATG GCCAATGTGG CGCAATTGGC CACGGGCGAT 
GATGCCGAGG CAATTAAACA AGCGATTGAA CGACTGGATG AGCAAACCCA AGATTTTGCC 
GCTAGACGTA TGGACAACTC TATTCGAGTG GCATTTAAGG GCCAATCGAT CGATAACATA 
TAG 

 

Protein sequence

MALLQIAEPG QSAAPHQHRL AVGIDLGTTN SLVAAVRSGE TATLPDEDGQ HSLPSIVRYT 
QDTVEVGALA ALSSAQDPKN TIVSVKRFMG RSLTDIQTGE QSFPYEFAES ENGLPLFVTP 
QGLVNPVQVS AEILRPLIAR AEKTLGGELQ GVVITVPAYF DDAQRQGTKD AAALLGVKVL 
RLLNEPTAAA IAYGLDSKQE GVIAIFDLGG GTFDISVLRL NRGVFEVLAT GGDSALGGDD 
FDHLLQEHMQ QVWLLGDIDV QLRRQLLIEA RRVKEALTDA NETEARIILA DGSELKQVVT 
KRDFDSLISP LVKKTIASCR RTLRDAGVTA EEVLETVMVG GSTRVPLVRE QVEAFFGKPP 
LTSIDPDRVV AIGAAIQADI LVGNKPESDL LLLDVIPLSL GIETMGGLVE KVVSRNTTIP 
VARAQEFTTF KDGQTAMAFH VVQGERELVA DCRSLARFTL KGIPPLAAGA AHIRVTFQVD 
ADGLLSVTAM EKSTGVQSSI QVKPSFGLSD TEIATMLKDS MKYAKDDISR RMLAEQQVEA 
ARVLESLHAA LAKDGDLLND DERGQIDATM ANVAQLATGD DAEAIKQAIE RLDEQTQDFA 
ARRMDNSIRV AFKGQSIDNI