| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2136 |
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| Symbol | |
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| ID | 5080012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2454190 |
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| End bp | 2455410 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499298 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001183656 |
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| Protein GI | 146293232 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCCAC AATTACAACC TAGTAGCACA GCCACTAATA TCAGACGCAT ACCCAATTTA
GGCCTGCTTA TTCCCATGCT AGCTGCCATA GTGGCAATTA CCCCTCTAGC TATCGACATG
TATTTACCCG CAATGTCGAC CTTGGCACTG AGTTTCCATA CCGACATCAC TACAGTGCAA
CAATCACTGA GCATCTATTT AGCAGGTTAT GCACTCGGCA TGTTGTGTTT TGGCCCATTA
GCCGATCGCA TCGGTCGAAG ACCTATGGTC ATTATGGGGC TGAGCGGATT TATGCTGACA
AGTTTTCTGA TTGGTTTTGC AGCACAAGTC GAAATCTTTT TAGGGCTGCG TTTCTTGCAA
GCTTTTATTG GTGCTGCGGC AACAGTCGTT GTTCCTGGGT ACATTAAAGA AGTGTATGGG
GACAATACGG CAAAAGGCAT GTCCTATGTC AGCTTAATTA TGATGCTAGC CCCCTTATTA
GCCCCCAGTA TCGGTAGCTT AATTTTAGAG TTAGGCGAAT GGCATTTAAT TTTCTTCATT
CAATCTGCCT ATGCAGCGCT GTTGCTGTTG ATGGTGATAA TACTGCTGAA AATGCCAAGC
GATAAAGATC AAGATACCCG TAGTCAAAAA TCCTTCTTAG GTGCATATGC CACTGTATTT
TCCCGTGCTG GCGTTAAACT GAATATTGCC AGTGGTGTAT TAACCTCCTT TGCCTTCTTC
TGTTACCTCA CAGCATCTCC CTTTATTTAT ATGGAAGTAT TTGATTTAGA TAAATCTTTT
TTTGCTATTT TATTTAGTAT TAATGTTGGC GCTTTGATGC TGGCCAATAT CCTTAATACC
CGAGTAATAG GTCGTTATGG CTCCTTAAGA ATGTTACACG TTTCAACTTT CTTTGGTGCC
TTGGCCGGTG TCGGACTATT AGCAGTAAAC TTACTAGAAC TTAGTTACCA CTTTACTGTG
ATGATGCTCA TTCCTCTCAT GGGGTGCTTA GGGATAATGT CGGTGAATGC CGATGCCATA
GTGCTCATGA AATTTAAACA AGAGACCGGA ACTGCTACTG CAGTTATTGG TACCTTAAGG
TTTGGTTGTG GTGCCCTTGC AGGCCCTCTG CTTGCTGTAT TTTATAATGG TACTGCCGTC
CCCTTCTCGG CATTAATGTT AGCAGCAGTG GTACTCGTGG GGATTTGTCA GTGGAATAGA
CCTAAGCATA AAGCAGGCTA G
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| Protein sequence | MDPQLQPSST ATNIRRIPNL GLLIPMLAAI VAITPLAIDM YLPAMSTLAL SFHTDITTVQ
QSLSIYLAGY ALGMLCFGPL ADRIGRRPMV IMGLSGFMLT SFLIGFAAQV EIFLGLRFLQ
AFIGAAATVV VPGYIKEVYG DNTAKGMSYV SLIMMLAPLL APSIGSLILE LGEWHLIFFI
QSAYAALLLL MVIILLKMPS DKDQDTRSQK SFLGAYATVF SRAGVKLNIA SGVLTSFAFF
CYLTASPFIY MEVFDLDKSF FAILFSINVG ALMLANILNT RVIGRYGSLR MLHVSTFFGA
LAGVGLLAVN LLELSYHFTV MMLIPLMGCL GIMSVNADAI VLMKFKQETG TATAVIGTLR
FGCGALAGPL LAVFYNGTAV PFSALMLAAV VLVGICQWNR PKHKAG
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