Gene Sputcn32_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2133 
Symbol 
ID5080009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2449634 
End bp2450260 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content42% 
IMG OID640499295 
Productlysine exporter protein (LysE/YggA) 
Protein accessionYP_001183653 
Protein GI146293229 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTG CATTTTTTTA CGACACACAA TTATGGAGTT TAATGACTTC GGCGGCGCTA 
TTTTGTGCCA CGATGACAAT GACACCCGGC CCGAATAATA TTCTATTGGC TAGCTCAGGT 
GCGCATTTTG GCGTATTACG GACTGTGCCA CATATTGCGG GGATCCGATT AGGCTCGACC 
TCTTTGCATC TATCGGTATT GCTTGGTCTT GGTGCTTTGT TTGCAACAGT CCCCCTATTG 
CATCAAGTGC TGAAATACTT CGCTTTAGCT TACTTGTTGT ATTTAGCTTA CAGATTAGTG 
ACTTTACCAG TGCAAGAAAC TTATCTAGAT GATGGGCGAA AACCAATGAC GCTAATAGAA 
GCTGCATTGT TTCAATGGAT TAACCCTAAA TCTTGGATGT CGACAATTAC CCTTTGTAGT 
GCTTTTACAT TAAGTGGGGA GGGCTTTTGG TTAAGTGCTT TTCTCGGCGT ATTAGTGTTT 
AACTTAGTGG GATTTCCAGC ATCATTTACT TGGGTATTGA TGGGCGCTGC GATCAGTAAA 
AAACTCAATA CCGCTAAACG TAAGCGACAC TTCAATTGGT TTATGGGTAG TTTACTTCTG 
GTGTCTTTAC CGATGATTTT ACGTTAG
 
Protein sequence
MNIAFFYDTQ LWSLMTSAAL FCATMTMTPG PNNILLASSG AHFGVLRTVP HIAGIRLGST 
SLHLSVLLGL GALFATVPLL HQVLKYFALA YLLYLAYRLV TLPVQETYLD DGRKPMTLIE 
AALFQWINPK SWMSTITLCS AFTLSGEGFW LSAFLGVLVF NLVGFPASFT WVLMGAAISK 
KLNTAKRKRH FNWFMGSLLL VSLPMILR