| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2112 |
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| Symbol | |
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| ID | 5078317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2428719 |
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| End bp | 2430779 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499274 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_001183632 |
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| Protein GI | 146293208 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCT CAACATTCGG CTTAAATGCG CACGCTCATT CAGCGGAGCA TTGGGTTGAC
TATGGCGCCA TCCAACTTAC GGCGCCACTA GCTGATTTAC TCAAACAGTG GGAGCAAGAG
CGATTGATAA CATCGCTCGA TCGGCATTTT GCACTACAAA TGAGTCAGTT ACATCAGGGT
GATAGCCAAA ATCCCCTGTT TATCTTACTC TGTGCGCTGT TGAGCCAACA GTTATCTTCA
CAGCATAGTT GCTTAGTACT TGCCCATATC GTGCCTCTCA ACCCCATGGC AGAGCAAGTC
AGTCATTGTA AAATCACATT AAGCCTTGAT GAATTAACTA GCATTCTGCA AACCTTTGAT
GCCGTGGGCC AAGCTGGCAG CAATAAACCC CTGATTATCG AAAATGGCAG ACTCTACTTA
CAGCGTTATC ATCAGTTTGA AACTGCTGTT GCCACCTCGT TAATTCAATT ATCCGCACAA
ACCAATACTG TAAAAGTTGA GGATCTTAAA AGTCACTTAG ATCAGTTATT CCCTGCCAAC
AATGCCGAAA TAATTGATTG GCAAAAAGTG GCAACGGCCA CCGCGCTTGG CAAAAAGCTG
GCGATTATCA CCGGTGGGCC TGGCACAGGT AAAACCACAA CGGTGACTAA GCTATTATTA
TTGTTGCAAT TGGAATCAAA CCAAACGATC CGCTTAGTCG CTCCTACGGG AAAAGCCGCG
GCGCGCTTAA GTGAATCCAT TAAGGCCTCA AAAGCCCGCC TTGCGAAAGA ACTGAGCCTT
AATCAAAGCG ACAATAGCCA AGCGATATTT TTAACCGCAC TCAGCCGAAT ACCAGAAGAG
GCCTCTACTT TACACCGACT ACTTGGGGTC ATTCCTAATT CACCTCAGTT TCGCCACCAT
CAAGGTAATC CGTTAAGGCT CGACTTATTG ATCGTGGATG AAGCCTCGAT GGTAGATTTA
CCTATGATGT ATAAGTTGTT AAATGCCCTA CCAGAGCATG CCAGTTTGAT TTTACTGGGG
GATCAAGATC AGTTGGCTTC CGTTGAAGCG GGTGCTGTAC TTGCCGATAT TTGTGCAGGT
TTAAAACTGC CTATGCCGCA AGGAGGTACA CAAGAATCAC TTTGGCAAAT GCGCTATTCG
CTCGAACAGG CCACACAGCT CAGTATATTG ACAGGCTATG ACTTAACACC ATTTATCAGC
CAGTCCCCCA AAATGGGCGA TAGTTTATGT ATGTTAATGC ATAGCCATAG GTTCAAAGGG
GATGCGGGCA TAGGACTCCT TGCAAGTGCA GTTAATCGCG CTGATCTTCA AGGGATTCTA
CAGGTGTGGC GCCAAGGATT TGCGGAGCTT AACTGGTTAG AACACAGTAC TCACCTGAGC
CAAACCCAAG CAAAAGTCAG TGAACCGGCA CACAACACTG GGCTTAACTT ACTGCTTGAA
CAAGCATGCG CACAATATGG CGATTACCTC GGTTTATTAA ATCAGGATAT AGGGAATCGT
CCTAGCACCG CAGAAATTAT CGAGCGTTTT AACCACTACC GGATTTTATG CGCCATGCGC
TCGGGTGATT ATGGGGTAGA AGGTATTAAC AGCTATGTCA CCCAAGCGCT CACCCATGCC
AAACTTATCA AACCACAACA GGAGTTTTAT TTAGGCCGCC CGATTATTAT CCAAAGTAAT
GACTATAACT TAGGCTTGTT TAACGGGGAT ATCGGACTAA TTCTACAGGA TGAAGATAAA
CCCGAACGCC TAATGGCACA CTTTATTAAG GCCGACGGTG GTCTGCTTAA AGTCTTACCC
GCACGTTTAC CAAAGCATGA AACCTGCTAC GCGATGACAG TGCATAAAAG CCAAGGGAGT
GAATTCAATC GCGTGGCTTT GGTGCTACCA CCGAGTCCAA GCCTAGCTCA GTGGCAACTA
TTAACTAAAG AATTAATTTA TACAGCAATT ACCCGCGCGA AAGCACATTT TACTTGCTTA
GGCTCCCAGC AAGTTTTTGA GCGAGCCAGC AGCCAAGTCA CCCAAAGGGC ATCGGGTCTT
GCCGATAGAC TTTGGGGTTA A
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| Protein sequence | MMRSTFGLNA HAHSAEHWVD YGAIQLTAPL ADLLKQWEQE RLITSLDRHF ALQMSQLHQG
DSQNPLFILL CALLSQQLSS QHSCLVLAHI VPLNPMAEQV SHCKITLSLD ELTSILQTFD
AVGQAGSNKP LIIENGRLYL QRYHQFETAV ATSLIQLSAQ TNTVKVEDLK SHLDQLFPAN
NAEIIDWQKV ATATALGKKL AIITGGPGTG KTTTVTKLLL LLQLESNQTI RLVAPTGKAA
ARLSESIKAS KARLAKELSL NQSDNSQAIF LTALSRIPEE ASTLHRLLGV IPNSPQFRHH
QGNPLRLDLL IVDEASMVDL PMMYKLLNAL PEHASLILLG DQDQLASVEA GAVLADICAG
LKLPMPQGGT QESLWQMRYS LEQATQLSIL TGYDLTPFIS QSPKMGDSLC MLMHSHRFKG
DAGIGLLASA VNRADLQGIL QVWRQGFAEL NWLEHSTHLS QTQAKVSEPA HNTGLNLLLE
QACAQYGDYL GLLNQDIGNR PSTAEIIERF NHYRILCAMR SGDYGVEGIN SYVTQALTHA
KLIKPQQEFY LGRPIIIQSN DYNLGLFNGD IGLILQDEDK PERLMAHFIK ADGGLLKVLP
ARLPKHETCY AMTVHKSQGS EFNRVALVLP PSPSLAQWQL LTKELIYTAI TRAKAHFTCL
GSQQVFERAS SQVTQRASGL ADRLWG
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