Gene Sputcn32_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2110 
Symbol 
ID5078315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2421269 
End bp2424949 
Gene Length3681 bp 
Protein Length1226 aa 
Translation table11 
GC content47% 
IMG OID640499272 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_001183630 
Protein GI146293206 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAGT TAATCCAGTC TAATCAAATG GAAGTACTCT GTGCCCATTT AGCCGCTTAC 
CTTCGCCAGA GTGTCCCCAA TACACGCCTA TTACGCAGTG AGCATATTCT GGTACAAAGC
CCCGGTATGT CGACTTGGTT ACGTCTTGAA ATTGCAAAGC AAAATGGTAT TGCAGCAGCA
CTCGAATTTC CTCTGCCCTC CAGTTTTACA TGGCAGTTGT GCCACCATTT ATTACCTAAT
GTCCCGAAGG AAAATGCCTT CACTAAGGCT GCAATGACCT GGAAACTCAT GCAGTTATTG
CCCCGTCTGT TAGCGGATGA TGCCTTTGGG CCACTTAGGC ACTATTTAGG TGATTTAAGT
TTACATACGT TAGGTAACAT AAATGGATTG GATGAATTGG CTCATCAGCG TCCTGCCGAT
GATATCAAGC TGTATCAGTT GTGCGGTCGT ATTGCCGATA TTTTCGATCA ATATTTAGTG
TATCGCCCCG ACTGGATGTT AGCTTGGGAG CAAAACCAGC ACCCTACAAC GCTCAACAAA
CCGCTCAATG AAGACCAACG CTGGCAGCCT ATTTTATGGC GCGCCTTAGT TGCCTTTAAT
CGAGATGAAC TCAATCAAAG CCATTATCAC AGGGCAAACC TACACAGCGC ATTGATTGAA
GCGCTCAATG ATCCCAATAC CTCACTAACC CCGTTGCCTC AACGGCTCTT TGTATTTGGT
ATTTCATCAA TGGCGCCTCA AACCCTTGAA GTGCTTTATC ATTTAGCAAG CCGTATTGAT
GTGATTATCT TGAGTTTGAG TCCATGCCAG CATTATTGGG GTGATATTAT CGATCCACGT
CACCGTGCAC GCATGGCGGT GCAATACGCA GGCAAGCGCC AATTAGCAGA GCAATGGGAA
GATAAACTTG AGGTTGGTAA TCCTCTGTTA GCAAACAATG GCAAGATGGG GCGTGAGTTA
CTCGATATGT TGCTTGAGCT TCCCGCCGAG CATTGTGATT TTGGTGATGA TGTTTACTGT
GAACCTTGCG ATGACCCTAA TGATCCTGCC AGTCACGCCA GTATGCTCCA CGGGGTGCAA
TACGATATTT TAGAGATGCA GACCTTAGAT AGCGTACTTG GGCCTGATGC TGCGCTTTAC
CAAAATATCG CAGCACGCCG CATACTTAAA AAAGATGACG AGTCAATACT CGTTAAGAGC
TGCCATAGCC CACTGCGAGA AGTCGAGACC CTACACGATC ACCTTCTCGA TATGTTAAGT
CGCCATCCCC AATTGTCCCC CAAAGATATT GTCGTGATGA TGCCCGATGT CGCCGCCTAT
GCGCCTTATA TCGATGCTGT GTTCGCAGCC AAACAGGGCC TGCATTATAT TCCCTATGCC
ATCGCGGATC GCGGCGCGGC ACAAGAATCA CCTCTTATTA ATAGTTTTTT GAATTTACTT
GGGATTAATC AAAGTCGTTT CGGCTTGACC GATATCCTCA GCATCCTCGA AGTACCCGCC
ATTTTGCGCC GTTTTCAGCT TGATGACGAT GAATTACAAC TGATCCGCCG CTGGCTTGAT
GAAGCTGGCG TTCGTTGGGG GCGAGATCAA CAAAGTCGCC TAAAACAAGG TGTACCCGCA
TTTGAGCAAA ACTCTTGGGC CTTTGGCATA AAACGACTGA TCTTAGGTTA TGCCTTAAGT
GACGATGCGC CGCTCTATCA AGATCATTTA GTGGTTACCG GCATAGAAGG ACAATCGGCA
CAAGCACTCG GTAAACTGCT CAACTTTATC GAAGCACTCG ATGAAACCCA ACAAATACTC
GAAAAGCCCC AAACGGGCGC CGTGCGTTTA ATGGAATTAA CGACATTATT AGATGCCTTT
TACGACACAG ATGAAGACGA GCGCGAGCAG TTACAAGATA TCCGCGATGC CATTGCCACC
CTAGAACAAG AGCTATTATC CGCAGGAAAA CCGATCGAGG CACTATCAAC AGCCCAAGCC
GATATCGCCA CGTCGCTAAC CTTAAGCATC GAAGTATTAC AGCAATGGTT TAATCAGCGT
TTAACGGAAT CCCGCGTTGG TCAACGCTAT CTTGCAGGCA GTGTCAACTT TTGTACCCTT
ATGCCCATGC GTTCCATTCC CTTTAAGCTT GTCTGTTTGC TCGGGATGAA TGACGGGGTA
TATCCAAGAG TGCAACACCC AGTCGGTTTT GACCTTATGG CCCACTTTGG GCCGCGTAAA
GGTGATCGCT CCCGCCGTCT TGATGATAGA TATCTGTTTT TAGAAGCCCT ACTCTCAGCG
CGCGAGCAGT TATATATCAG CTACATTGGT CGCAGTGAAA GGGACAACTC GGAGCGTATC
GCCTCGATGC TTGTTTCTGA ACTGATTGAA TATTGTCAGC TTTGTTATCT GCCTGAAGAT
CTATCGCCGC AGCTTGCCAC TATCAGTAAC AGTGAAGAGG TAGAAAAAGC CCTGCTCAAT
GAGATTGTCA GTCAACAGCC ATTGCAACCC TTTGATCCTA AGTTGTACCA AGCCGAAACG
GCGGGCACAA AAGGGATCAA GCAAAGTTAC AGCCAACAAT GGTGTCCACC CAATACTCGA
ACGGATAATG GTCGTTTTAT CGATGAATTC ACTCGGATAG TGGTCGAGAA TGAAATCACA
CAGGCCGCTA TTATTGAAGA AGAACATCTG GATATTTCAG CCTTGATCCG CTTCTTTCGT
AATCCGGCAC AATACTTCTT TAACCGTACA CTCAAGGTTG ATTTAAGCCT TAATATTCAA
GCTGATGACA ATGACGAACC CTTTAGCTTG AATGCCCTTG AACGCTATAT GTTACAAGTA
CAACTACTCG ACAATAGCAT AAGCCAAGGT GTGTTAGAAC CGGACATTGA GCTTTTAAAA
CGCCTAAAAG CCAGTGGTAA CTTGCCCATG CATCCCTTTG ACGACCTACT GCTACGCCAA
TATCAGCAGG ACATTAAACC GCTTATTGGC AGGACCTTAT TCCTTAAAGG CGAGCAGCAG
AGCCATCATG CAGACATTAG ACTTAGCTTC GATTTAGCGA TTTCACCCAC AACTCAGCCC
AGTAAAACGC GCAGAGTATG GCTTGAAGGT CGCATTGATG ATATTAGCCC TAAGGGACTC
ATCAATTACC GCCCTGGCAG TGCCCATGGT CGCGATATAC TGAGGCTGTA TTTACGCCAC
CTGTGCCTTA TGGCGATGGG GTATGACCAT GCTAGCTATC TATTGGATAT GGGACATTTT
CATGCGCTTT CGCCCATCAC GCCAGAGCAC GCCCACCAGC TATTGACTGA TTTACTGCAA
CTCTTTTATC AAGGTCAACA GCATCCCCTG TGTTTTATGC CACGCACCGC CCTTGCTTAC
GCGAGCAGTG AAGGCGAACA TGCTGAAAGA CTCAATGAGG CACAGGCTGA ATGGCTAGAT
GAACAAGGAG AAATAGGTGA AGGTACAGAG CCCCATTATC AACGGCTATT CCAATTCCCA
CAGGATTTTA CTGAAAACAC CTTTGGCGTA CTCGCCGACC GTATTTATCG CCCCATGGTC
AGTTTATACG TGAAAGACAC GCTGGCTCAG CTTGAGGACT TTGCCCTCAA TAATGGCATG
AACCTCGGAA GTGTTAACTT AGATCCAGCG GCCGACATCA ATAGCGTTAG CACACAACAG
CATATCTCAC GGGGAGAATA A
 
Protein sequence
MLKLIQSNQM EVLCAHLAAY LRQSVPNTRL LRSEHILVQS PGMSTWLRLE IAKQNGIAAA 
LEFPLPSSFT WQLCHHLLPN VPKENAFTKA AMTWKLMQLL PRLLADDAFG PLRHYLGDLS
LHTLGNINGL DELAHQRPAD DIKLYQLCGR IADIFDQYLV YRPDWMLAWE QNQHPTTLNK
PLNEDQRWQP ILWRALVAFN RDELNQSHYH RANLHSALIE ALNDPNTSLT PLPQRLFVFG
ISSMAPQTLE VLYHLASRID VIILSLSPCQ HYWGDIIDPR HRARMAVQYA GKRQLAEQWE
DKLEVGNPLL ANNGKMGREL LDMLLELPAE HCDFGDDVYC EPCDDPNDPA SHASMLHGVQ
YDILEMQTLD SVLGPDAALY QNIAARRILK KDDESILVKS CHSPLREVET LHDHLLDMLS
RHPQLSPKDI VVMMPDVAAY APYIDAVFAA KQGLHYIPYA IADRGAAQES PLINSFLNLL
GINQSRFGLT DILSILEVPA ILRRFQLDDD ELQLIRRWLD EAGVRWGRDQ QSRLKQGVPA
FEQNSWAFGI KRLILGYALS DDAPLYQDHL VVTGIEGQSA QALGKLLNFI EALDETQQIL
EKPQTGAVRL MELTTLLDAF YDTDEDEREQ LQDIRDAIAT LEQELLSAGK PIEALSTAQA
DIATSLTLSI EVLQQWFNQR LTESRVGQRY LAGSVNFCTL MPMRSIPFKL VCLLGMNDGV
YPRVQHPVGF DLMAHFGPRK GDRSRRLDDR YLFLEALLSA REQLYISYIG RSERDNSERI
ASMLVSELIE YCQLCYLPED LSPQLATISN SEEVEKALLN EIVSQQPLQP FDPKLYQAET
AGTKGIKQSY SQQWCPPNTR TDNGRFIDEF TRIVVENEIT QAAIIEEEHL DISALIRFFR
NPAQYFFNRT LKVDLSLNIQ ADDNDEPFSL NALERYMLQV QLLDNSISQG VLEPDIELLK
RLKASGNLPM HPFDDLLLRQ YQQDIKPLIG RTLFLKGEQQ SHHADIRLSF DLAISPTTQP
SKTRRVWLEG RIDDISPKGL INYRPGSAHG RDILRLYLRH LCLMAMGYDH ASYLLDMGHF
HALSPITPEH AHQLLTDLLQ LFYQGQQHPL CFMPRTALAY ASSEGEHAER LNEAQAEWLD
EQGEIGEGTE PHYQRLFQFP QDFTENTFGV LADRIYRPMV SLYVKDTLAQ LEDFALNNGM
NLGSVNLDPA ADINSVSTQQ HISRGE