| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2104 |
|---|
| Symbol | |
|---|
| ID | 5078309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2412318 |
|---|
| End bp | 2413874 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640499266 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001183624 |
|---|
| Protein GI | 146293200 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.607769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTT CTCAATCTTT TTCCGTTGCC GACATCATCG GTTTTATCGC CATCGCGTTC
TTGGGTCTTT TGATTGGTGC CCTTCTCAAT CAACGTTTAA CGCGCCAGCG TTGGCAGCAG
TTTAAAGACG AACTCGAACA AGAAATGCGT CAAGTCAATG AAGATGCTGA ACTCTCATTG
GCACAACAAC AAATACTGGT CGATGACAAA GAAGCACAAT TACGTCAATA CCAGCAAAGA
TTAGAGCAAA AAATTGAGCA ATTAGGTAAA GCCGAAGCCT TAGCCGAGCG TGTACCGAGT
TTAGAGCTGC AGCTTAACGA TAGCCAGCGT CGCCAATTAG AATTGCAGTT AGCATTATCA
AAATCCAATG CCATGCAGCA GACAATTCAA GCGAAGGCCG ATGCCCAGCA GGAATCCCTT
CAGGAAAAAA TTGCCACCTT AGAAACCGCC GAGGTGCGTC TTAAAACCCA GTTTGAAAAT
CTGGCGAATC GTATTTTTGA AGAGCGAAGC GAAAACTTTA AGCACCAAAA TGCCAGCCAG
CTAGAGGGTG TCTTAGGCCC ACTAAAACAA CAGCTTGAAG GGTTTAGACA ACAAATCCGA
GAATCCTACA CCCACGAACA ATCCGAGCGC AGTGCCCTTA AACATCAACT CGAACATCTA
CGAGAACTTA ATTTAAAGAT GAGCCAAGAT GCCATCAATC TCACGAAAGC GCTCAAAGGG
GATAACAAAC AACAGGGCAA CTGGGGAGAG GTGATACTCG ATCGTGTGCT ACAAGAAAGT
GGCCTACGTG AAGGACATGA ATACCATACT CAGCAGGATT TAAAAGATGA TAATGGCAAA
CGATTTAAGC CCGACGTCAT CGTCCATCTT CCCGAAAACA AAGATGTCGT AATCGATGCC
AAAATGTCAC TGGTGAGTTA CGAGCGCTAT TTTAACAGTG AAGATCCCGC CCTACGCCAA
CAGGCTATCA ACGAGCATGT GATCTCGATT CGTAACCATA TTAAGGGATT GAGCCAGAAG
GATTATCAAC ATTTACATGG GCTTAAAAGT TTAGACTATG TGCTGATGTT TATCCCCATT
GAACCTGCAT TCTTGCTCGC CTTGGAGCAC GACCCAAGTT TAGTGAATTT TGCACTAGAG
CAAAATATTA TGCTGGTCAG CCCGACCAAT CTTTTAGTGG CACTGCGTAC AATCAATAAT
ATTTGGCGTT ATGAATATCA AAACCAACAT GCTCAAACTA TCGCCAAGCA GGCTGGCCGC
ATTTACGATA AATTATGTGG CTATATAGAA GACATGGAAA AGCTTGGTCG TGCCTTAGAT
AACGCGGAAA AAACCTACCA TAGTGCAATG AACAAGCTAT CATCGGGCAA AGGTAACTTA
GTTCGCCAAG CCCATTTAAT GCAGCAACTC GGTGTAGATA CCAGTAAACA ATTGGACAAA
ATGTTGCTGC AAAAAGCATT GAATGAAGCG CAAGACGACA GTGACACAGA GGACGATGAG
CCAACTCAAA CACTCGCCCA TGGGCCACAG GGAATTGCCG AACTGGAACC CTATTAA
|
|---|
| Protein sequence | MPFSQSFSVA DIIGFIAIAF LGLLIGALLN QRLTRQRWQQ FKDELEQEMR QVNEDAELSL
AQQQILVDDK EAQLRQYQQR LEQKIEQLGK AEALAERVPS LELQLNDSQR RQLELQLALS
KSNAMQQTIQ AKADAQQESL QEKIATLETA EVRLKTQFEN LANRIFEERS ENFKHQNASQ
LEGVLGPLKQ QLEGFRQQIR ESYTHEQSER SALKHQLEHL RELNLKMSQD AINLTKALKG
DNKQQGNWGE VILDRVLQES GLREGHEYHT QQDLKDDNGK RFKPDVIVHL PENKDVVIDA
KMSLVSYERY FNSEDPALRQ QAINEHVISI RNHIKGLSQK DYQHLHGLKS LDYVLMFIPI
EPAFLLALEH DPSLVNFALE QNIMLVSPTN LLVALRTINN IWRYEYQNQH AQTIAKQAGR
IYDKLCGYIE DMEKLGRALD NAEKTYHSAM NKLSSGKGNL VRQAHLMQQL GVDTSKQLDK
MLLQKALNEA QDDSDTEDDE PTQTLAHGPQ GIAELEPY
|
|---|
| |