Gene Sputcn32_2102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2102 
Symbol 
ID5078307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2410395 
End bp2411018 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content44% 
IMG OID640499264 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_001183622 
Protein GI146293198 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0694492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGAT TAACGGCGAA GCATGTCATT TGGCTTAAGA GTGTGTTCCA CTTAATCGGT 
GTTATACCTA TTGCCTATTT AGTTATCCTA GTCACAACGG GTCGCGCGGG TGGCGATCCG 
GTCCAGTACA TCATTCACTT TACTGGAATG GGCGCACTCA ATGCATTAGT GGCGACCTTA 
CTTATCTCAC CCATTGCTAA GCTCACTAAA CAAGGTGTAT TAATGCAAAC CCGCCGTTTA 
GTCGGCTTAT ATGTATTCGC CTATGCTACC TTGCATATTC TGGCTTTTTT TAGCTTGGAT 
TTGCTGTTTG CTTGGGGCCT TTTGTTGAGT GAAGTAGTGA AGCGCCCTTA TATCCTAGTG 
GGTGCCTTTG CTTATCTTAT CTTAGCAACA TTAGCCGTAA CCTCGTTTAA GGCATTAATG 
CGTCGAATGG GGCGTCGCTG GCAAATAATC CACAATGGCG TGTATTTGGT TGCCATACTC 
GCACCAATTC ATTTTTATTG GTCGGTTAAA TCGGAAATTA TTGAACCGAG TTTATATCTT 
GTGGGGTTTT GTTTGTTATT GCTATGGCGG CTACCATTGA AGCGTGTTGG ACGGGATATT 
ACAGACGGGA AAATGGCAAA ATAA
 
Protein sequence
MLRLTAKHVI WLKSVFHLIG VIPIAYLVIL VTTGRAGGDP VQYIIHFTGM GALNALVATL 
LISPIAKLTK QGVLMQTRRL VGLYVFAYAT LHILAFFSLD LLFAWGLLLS EVVKRPYILV 
GAFAYLILAT LAVTSFKALM RRMGRRWQII HNGVYLVAIL APIHFYWSVK SEIIEPSLYL 
VGFCLLLLWR LPLKRVGRDI TDGKMAK