Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2101 |
Symbol | |
ID | 5078306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2409824 |
End bp | 2410321 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499263 |
Product | lactoylglutathione lyase |
Protein accession | YP_001183621 |
Protein GI | 146293197 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
TIGRFAM ID | [TIGR00068] lactoylglutathione lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0339497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTCGT TAACGCAATT TTTAGCATCA TATAAAAGCA CATTTTTGTT ATACTCGACC GCGCAATTCA TTGACCGAGA GAAACCTATG TCTCAACTGT TACACACTAT GATCCGCGTC GGTAACTTAG AACGCAGTAT CGCTTTTTAT ACCCAAATAT TAGGCATGAA ATTACTACGT ACCTCTGAAA ATCCAGAGTA TAAGTATTCT TTGGCATTCG TTGGTTATGG CGAGGAATCC ACAGGCCAAG CCGTCGTTGA GCTGACCTAT AACTGGGGCA CAGATAAATA CGATTTAGGC ACAGGTTTTG GTCACCTTGC TATTGGTGAT GAAGATATTT ATGCCCGCTG TGAGGCCATT GCCGCAGCAG GTGGTAAAGT CACACGCGCA CCAGGTCCTG TCGCTGGTGG CACAACAGAA ATCGCCTTTG TCGAAGATCC AGATGGTTAT AAGATTGAAT TTATTCAAAT GAAATCAGCC ACTCAAGGTT TAGGCTAA
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Protein sequence | MISLTQFLAS YKSTFLLYST AQFIDREKPM SQLLHTMIRV GNLERSIAFY TQILGMKLLR TSENPEYKYS LAFVGYGEES TGQAVVELTY NWGTDKYDLG TGFGHLAIGD EDIYARCEAI AAAGGKVTRA PGPVAGGTTE IAFVEDPDGY KIEFIQMKSA TQGLG
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