Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2099 |
Symbol | |
ID | 5078304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2407677 |
End bp | 2408126 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640499261 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001183619 |
Protein GI | 146293195 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00262035 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCGG GGCATCCCAA TACCACTCAA CATCATTCGA CTGATCACAG CTTGAACCAT GTGATTATTG AGTTTTACGA AAAGCTGTCG TCTTGGGAAC ATGCTATCGT GCGTGACAAA GGCTTCAGCT TGTCGCAGGT ACATACCATT GAGTTACTCG GCGTACATGG CGCCATGAGG ATGAAGGAAC TGGCCGATAA AATCGGTGTC ACTACGGGTA CCCTTACCGT ACAAATCGAT AAAATGGTGG AAGCTGAGTG GGTTGTACGT CGTCCCCATG AAACCGATCG TCGTTCGATT CTGGTGGAGT TAACCGAAAA GGGCCAAACT TTGTTCCTCG AACATGATGC TCTGCATCTA CAGCTCACCA CAGATCTCAC CGCTAAAATG AGCAGTGAGG AACGTATCGT GCTGCTCAAT TTATTGTCTC GTATGAATAA CGAGTTTTAA
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Protein sequence | MTAGHPNTTQ HHSTDHSLNH VIIEFYEKLS SWEHAIVRDK GFSLSQVHTI ELLGVHGAMR MKELADKIGV TTGTLTVQID KMVEAEWVVR RPHETDRRSI LVELTEKGQT LFLEHDALHL QLTTDLTAKM SSEERIVLLN LLSRMNNEF
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