Gene Sputcn32_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2099 
Symbol 
ID5078304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2407677 
End bp2408126 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content47% 
IMG OID640499261 
ProductMarR family transcriptional regulator 
Protein accessionYP_001183619 
Protein GI146293195 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00262035 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCGG GGCATCCCAA TACCACTCAA CATCATTCGA CTGATCACAG CTTGAACCAT 
GTGATTATTG AGTTTTACGA AAAGCTGTCG TCTTGGGAAC ATGCTATCGT GCGTGACAAA
GGCTTCAGCT TGTCGCAGGT ACATACCATT GAGTTACTCG GCGTACATGG CGCCATGAGG
ATGAAGGAAC TGGCCGATAA AATCGGTGTC ACTACGGGTA CCCTTACCGT ACAAATCGAT
AAAATGGTGG AAGCTGAGTG GGTTGTACGT CGTCCCCATG AAACCGATCG TCGTTCGATT
CTGGTGGAGT TAACCGAAAA GGGCCAAACT TTGTTCCTCG AACATGATGC TCTGCATCTA
CAGCTCACCA CAGATCTCAC CGCTAAAATG AGCAGTGAGG AACGTATCGT GCTGCTCAAT
TTATTGTCTC GTATGAATAA CGAGTTTTAA
 
Protein sequence
MTAGHPNTTQ HHSTDHSLNH VIIEFYEKLS SWEHAIVRDK GFSLSQVHTI ELLGVHGAMR 
MKELADKIGV TTGTLTVQID KMVEAEWVVR RPHETDRRSI LVELTEKGQT LFLEHDALHL
QLTTDLTAKM SSEERIVLLN LLSRMNNEF