| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2096 |
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| Symbol | |
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| ID | 5078301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2402272 |
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| End bp | 2403378 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640499258 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001183616 |
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| Protein GI | 146293192 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCCCC ATATCCAAAT TCGATCAGTT GAGCTAACTT ATGTTATACA AAAAATTAAC
AATAATATGG TTTCAATATT TATGTTTTCT GTTGAAAATA AAGAACTTGA TTCCGCGGCG
CAAATTTTGC GGCTAGCCGT GCCACAAATG TCGGCCCTTG ATATCCCCGT TACCCCGGAA
AACTATACGG TTTGGTATGA ATATTTTGCG GGGACTAATC TTGACTTAAA CCGTGCGATT
GATGGTTTTA TCGCAAACGG TGTTGTGTTT ACAAAAGAGG TTAATACAAG CTTATATAAA
AATTTTATCC AAGAACAATC CCCCGAGGTG ATTGAGAATG TGCAAATAGA GACTCAGATT
TTAATCAATT CATTACTGTG CAAAATTGTA CAATTGAACC AAGGGACCGC GGATTTTTCG
GGCACTTTAG CGGAATTTGG CATCAAGCTT CAATCCAATT CTGACATTAA TACCTTAAAT
CAACTTGTTG ATGGTGTGAT GGATGAAATG CAAAGTTTAC TGATCAACAA CCAAAACATG
GAACAAAGCC TAAATGCCAT GGGGCAAGAG GTACAACATC TTAAGTCGGA AATGGAAAAT
TTAAGTCTGG CGGCCATGAC GGATCAATTA ACCTCTTTAT ATAATCGCCG CGCCTATGAA
ATTGCCATTC AAGACCATAT TCACCGCGCC CAAGAACAGC ATTCCCGTTG TAGCTTACTG
ATTGTTGATA TAGATAGGTT TAAACAATTT AATGATACCT ATGGTCATCA AATTGGCGAT
AAAGTATTAG CTTATGTCGC ACTCGCCTTA AAGCAATGTG TTCGAGGTGA TGACTTTGTT
GCTCGCTATG GTGGCGAAGA GTTTGTAGTG CTTTTGCCTA ATACCCATTT TCACGATGCT
TTACAAGTTG CGGAAACCTT AAGAGAACGT ATTTCAGAGC GGCACTTAAC CATAGGTAAA
GATAAAAAAT TATCCCTCGG CGCAATTACA GTATCGATCG GTCTTGCCTC ATTACAAGAG
GGTGATGATG CCGAAACGCT CTTTAGCCGA GCGGATAAAG CCTTATATGA AGCTAAATCC
GATGGGCGTA ACTGTGTTAG GGGATAG
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| Protein sequence | MLPHIQIRSV ELTYVIQKIN NNMVSIFMFS VENKELDSAA QILRLAVPQM SALDIPVTPE
NYTVWYEYFA GTNLDLNRAI DGFIANGVVF TKEVNTSLYK NFIQEQSPEV IENVQIETQI
LINSLLCKIV QLNQGTADFS GTLAEFGIKL QSNSDINTLN QLVDGVMDEM QSLLINNQNM
EQSLNAMGQE VQHLKSEMEN LSLAAMTDQL TSLYNRRAYE IAIQDHIHRA QEQHSRCSLL
IVDIDRFKQF NDTYGHQIGD KVLAYVALAL KQCVRGDDFV ARYGGEEFVV LLPNTHFHDA
LQVAETLRER ISERHLTIGK DKKLSLGAIT VSIGLASLQE GDDAETLFSR ADKALYEAKS
DGRNCVRG
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