Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2090 |
Symbol | |
ID | 5078295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2393846 |
End bp | 2394520 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499252 |
Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
Protein accession | YP_001183610 |
Protein GI | 146293186 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.427939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCATT CTGCAACCCG CATTCGTACA CTAGTATTTA GTCCTGCAAT ACGAATTTTT CACTGGCTTA GGGCACTATC AATATTGGTG CTGGTGATCA CAGGATTCTA TATTGCTTGG CCGTTTCTTG TGGCACCAGA AAGTAGCGAT GTACTCATTC AAGGTTGGAT CCGTTTTGCT CACTTGGTTT GTGGTTTTTT ACTGACCGCA ATTACTTTAG TTCGCTTCTA TCTGTATTTT TTCAGCCGAA GCGATATTGA GCGACGTTCA TTCCGGGATG TAATGAGTAT CCAAAGTTGG ATAACCCAAC TGAAATCCTA TATTTGGATG GGACATTTGC ATAAAGCGGG AGTCTATGGA CCACTGCAAT TTGTGACTTA TGTAGCAATA TCCTTAGTTG CACTGGTGAT TTGTATTACA GGCCTCGTTT TATATGCCAA TGTATACCAC GAAGGTTTAG GTGGCATGCT TTGGGGAAGC GCAGCCTGGA TTACAGCACA AATGGGTGGA CTCGCACAGG TTAGGATTTG GCACCACTAC CTCACTTGGG CATTTGTTAT CTTTGTGGTT ATCCACGTCT ATATGGCGGT TTGGTCAGGG ATACGCTTCA AACATAACTC TGTTGACTCA ATTGTCTCTG GCTATGACTA CCATAAGCCA GACTCACATC ACTAG
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Protein sequence | MNHSATRIRT LVFSPAIRIF HWLRALSILV LVITGFYIAW PFLVAPESSD VLIQGWIRFA HLVCGFLLTA ITLVRFYLYF FSRSDIERRS FRDVMSIQSW ITQLKSYIWM GHLHKAGVYG PLQFVTYVAI SLVALVICIT GLVLYANVYH EGLGGMLWGS AAWITAQMGG LAQVRIWHHY LTWAFVIFVV IHVYMAVWSG IRFKHNSVDS IVSGYDYHKP DSHH
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