Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2085 |
Symbol | |
ID | 5078290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2388531 |
End bp | 2389850 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499247 |
Product | hypothetical protein |
Protein accession | YP_001183605 |
Protein GI | 146293181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00496552 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATA AACAAAATAC CATTCCAAAT AGACAAACAA AGCAGATTGC AGGCGCCTTA GCACTCGCCA GTTGTGGCCT GTTTACCACC AGTGGCCATG CCACTGAATT AGCTAAAAAA AACGATGAGT GGAAAATTGA TGCCGCGCTA ATGTATTACG GCGAGCAAGA TAGAGTACAG GCGATTGAGG CGATTGGAAC CGCACAAAAG GCCTTTGGTG ATGAGAGTGT GTTGGATCTC AAATTGGTTG TTGATAGTTT AACAGGTGCA TCAGCATCGG GAGCCGTCGC TCAAAACAGC AGTCAAACCT TTACTCGTCC CTCTGGTAAT GGTCAGTATC ATGTATCCGC AGGGGAAACG CCGTTAGATG ACACCTTCCA TGATACGCGT GTGCAAGCCA ATGCGGCTTG GAGCGAAGTG CTGGATCCGG ATTGGAAGCT CAATGTTGGT GTCTATGGTT CTAAAGAGTT TGATTATATG TCTATCGGAA CCAATGTTGG CATTGAGCGG GGCTTTAATA AGGATAATAC GACGTTATTT TTGGGGACCG CCTACAGTTT TGATGTGGTC GATCCGGTCG GAGGACGGCC AGTCGATTTA TCTTCTATGG CGATTCGCGA TAACTTCACG ACGCAGGAGG CCTATCGCAA TGCATTTGAT GCGACACGTC AAGGAGGTAG CGATAATAAA CAAATGGCCG AGGTTATGTT AGGTGTTACC CAAGTACTCA ATCAGCGTTG GTTATTACAA GCAAACTATG GTTTATCGAG TGTTAATGGC TACTTGACCG ATCCCTATAA AGTACTCAGT GTGGTCGATA AGAATGGTAT CACTCAGGAT ATATTGTATG AAAGTCGGCC TGACTCCCGC TTAAAACACA GTTTTTATGT GATGACAAAA GGGGCATTAG ATTCTGGTGT GGTCGATTTT TCCTACCGCT ACAATACCGA TGATTGGGAT CTCACCTCGC ATACCCTAGA GACCCATTAC CGTTATTATT TTAGCGGCAG TTTCTATGGT CAATTGCATT TACGTTACTA CCAACAAAGT GCGGTCGATT TTTATCAGCC CTTTTTAATG GCTGATATTC CTTTACCTGA ATTTGCCAGT GCCGATTACC GAATTGGGGA GATGACGGCG TACACCATTG GGATTAAATT TGGTCATAAA CTATCGGGTG GACACGAAAT CTCTTATCGA TTGGAATATT ATCAACAAGA TCCTAAAAAT AACGGCACAA GTATTCCTGG AGAGCTACAA AATTTCGATC TTTTCCCGAC TCAAAAGGCG ATTGCAGCAC AGTTTAGTTA TTCTTTTTAA
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Protein sequence | MTNKQNTIPN RQTKQIAGAL ALASCGLFTT SGHATELAKK NDEWKIDAAL MYYGEQDRVQ AIEAIGTAQK AFGDESVLDL KLVVDSLTGA SASGAVAQNS SQTFTRPSGN GQYHVSAGET PLDDTFHDTR VQANAAWSEV LDPDWKLNVG VYGSKEFDYM SIGTNVGIER GFNKDNTTLF LGTAYSFDVV DPVGGRPVDL SSMAIRDNFT TQEAYRNAFD ATRQGGSDNK QMAEVMLGVT QVLNQRWLLQ ANYGLSSVNG YLTDPYKVLS VVDKNGITQD ILYESRPDSR LKHSFYVMTK GALDSGVVDF SYRYNTDDWD LTSHTLETHY RYYFSGSFYG QLHLRYYQQS AVDFYQPFLM ADIPLPEFAS ADYRIGEMTA YTIGIKFGHK LSGGHEISYR LEYYQQDPKN NGTSIPGELQ NFDLFPTQKA IAAQFSYSF
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