Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2078 |
Symbol | |
ID | 5079504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2377865 |
End bp | 2379712 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640499240 |
Product | signal peptide peptidase SppA, 67K type |
Protein accession | YP_001183598 |
Protein GI | 146293174 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000218784 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCTA ACCCATCGTT TTTCAAGAGA ATATGTTTGT TTATTTGGAA TATCCTCAAC GGAACCCGTA AACTCATCCT CAATCTGATC TTTTTTGGTA TCTTGGCAGT CATCATGATT TCCATAACTG CCGGCGAAGA TATCCAAGTC GAAGATAACT CGGCACTGGT ACTTAACCTA GCCGGTTCTA TCGTCGATCA AAAACAACAG ATTGATCCTA TAGAAGCGGC GCTCAAACAA GGGAATAAGG CAAATGCCGA TGGTGAAATC CTGCTCGCAG ATGTGTTATA TGTGATTGAT AACGCAGCAC AAGATACAAG GATAACAACC CTAGTTTTAG ATTTAGCCGA TCTTAAACGT GCGGGGATCA GTAAACTACA ATCTATAGGT AACGCCATTA ACCGCTTTAA AGAAAGCGGC AAACAAGTGG TTGCCATTGG TAATTATTAC GAACAGAATC AATATTTTCT CGCCAGCTTT GCCGATACGA TATATCTCAA TCCTCAGGGG GGTATTTCAC TCGATGGCCT CAGCATGTAC AACTTATACT TCAAATCGGC TTTAGAGAAA CTCAAAATAA AAGCCCATAT TTTTCGGGTC GGTACCTTCA AATCTGCTGT TGAACCCTAT ATGCGCGATG ATATGTCTGA TGCTGCAAAA GAAGCTAACA GCGCACTGCT CGCCGATGTA TGGCAAAGTT ATACCCAAAC AGTTGCCAAC AATCGCAATA TAGACGCCTC AGCCCTCGTT CTCGATGCAT CAACCTACTT AGCCGAGTTA GATAAAGCCC AAGGCGACTC TGCGACGATG GCTATCAATA TGAAGTGGGT TGATTCACTC GCCACTGCTG AAGATTTCCG CAAAACCATG CTCGATACGG TAGGCAAAGC GAAAAGTGGC GATAGTTTTA AGCAAATCAG TTTTTATGAC TATTTAACCC TTGTCGCCCC TAAACCTAGC TTTATTGAGC AAGATAGCGT TGGAATTATC GTTGCCAGTG GCACTATCCT CAATGGCAAG CAACCTGCTG GACAAATTGG TGGCGATAGC ACGGCAGAAT TGTTACGTAA AGCCCGCTTT GATAAACACA TTAAGGCCTT AGTGCTTAGA GTGGATAGCC CTGGCGGAAG TGCTTTCGCA TCAGAGCAAA TTCGCCAAGA ACTACTCGCC TTAAAAGCGG CGGGTAAACC TGTGGTTGTC AGTATGGGAA GCCTTGCTGC ATCCGGCGGC TATTGGATTT CGGCCAGTGC AGATTATATT TTTGCAACGC CCACTACACT TACAGGCTCA ATCGGTATTT TTGGTATGAT CACCACTTTT GAAGATTCCC TTGATAGCAT AGGAATACAT ACGGATGGCG TATCCACATC TGAATGGGCT GGTTTATCGG TGACTCGTAC CCTTTCATCA TCGGTTGAAG CGGTTATCCA GCGCCATATT GAGCGAGGTT ATCTCAATTT TATTTCCCTC GTTGCCAAAG AGCGTAACAT GACCTTAGAA CAGGTCGATA GCATCGCCCA AGGGCGGGTG TGGAGCGGTA AAAAAGCCCT TGAGTTAGGT TTAGTCGATG AGCTAGGCGA CATCGATGAA GCTATCGCCA AAGCCGCAAA ATTAGCCAAT TTGAATCTAT TTGATACCCG TGTGATTGAA CAGGAATTAA CCCCTGAACA ACTCTTTATT CAGCAAATGT TTGCTTCAGT ATCGAGTTAT TTACCGGCAT CACTTAGCCA TTCTTCTGTG CTTGAGCAAA TGCTACAACA ATGGACTGGT AGCCTAAAGA CGATTACCTC TTTCAATGAT CCTAATCATG TTTATATTTA CTGTGACAAC TGTGAGTTAC TCAATTAA
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Protein sequence | MSANPSFFKR ICLFIWNILN GTRKLILNLI FFGILAVIMI SITAGEDIQV EDNSALVLNL AGSIVDQKQQ IDPIEAALKQ GNKANADGEI LLADVLYVID NAAQDTRITT LVLDLADLKR AGISKLQSIG NAINRFKESG KQVVAIGNYY EQNQYFLASF ADTIYLNPQG GISLDGLSMY NLYFKSALEK LKIKAHIFRV GTFKSAVEPY MRDDMSDAAK EANSALLADV WQSYTQTVAN NRNIDASALV LDASTYLAEL DKAQGDSATM AINMKWVDSL ATAEDFRKTM LDTVGKAKSG DSFKQISFYD YLTLVAPKPS FIEQDSVGII VASGTILNGK QPAGQIGGDS TAELLRKARF DKHIKALVLR VDSPGGSAFA SEQIRQELLA LKAAGKPVVV SMGSLAASGG YWISASADYI FATPTTLTGS IGIFGMITTF EDSLDSIGIH TDGVSTSEWA GLSVTRTLSS SVEAVIQRHI ERGYLNFISL VAKERNMTLE QVDSIAQGRV WSGKKALELG LVDELGDIDE AIAKAAKLAN LNLFDTRVIE QELTPEQLFI QQMFASVSSY LPASLSHSSV LEQMLQQWTG SLKTITSFND PNHVYIYCDN CELLN
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