| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2071 |
|---|
| Symbol | |
|---|
| ID | 5079497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 2369282 |
|---|
| End bp | 2369992 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640499233 |
|---|
| Product | 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | YP_001183591 |
|---|
| Protein GI | 146293167 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000425101 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATA ATACCAATGT AGACCCACAG GAAATCGCAA AGTTTGAACG TATGGCCGAG
ACTTGGTGGG ATCTTAACGG CGAATTTAAG CCGCTGCATC TACTAAACCC GCTGCGCTTA
AACTATATCG ATCAAACCGC TGGCGGTATT TTCGGTAAAA AAGTGCTCGA TGTAGGTTGT
GGTGGAGGCA TTTTATCTGA AAGCATGGCG CGTATCGGTG CCGAGGTTGA TGGTCTGGAT
ATGGGTGAAG AACCCTTAGA AGTCGCGCGT CTTCACGCGC TGGAAACCGG TGTAAACATC
ACTTATGTAA AAAATACGGC CGAAGCCCAT AGCCAAGATC ATCAAGGCTA TTACGATGTG
GTAACTTGCA TGGAAATGCT CGAGCATGTG CCTAATCCGC AATCGGTCAT CAAGGCTTGC
TGCGATATGG TAAAACCCGG TGGCTTCGTA TTTTTCTCAA CCATTAACCG CAATCTAAGA
TCTTATGTTG AAACGATTTT AGGTGCCGAA TACCTGCTAA AAATGCTACC AGTTGGCACC
CATGATCATA ATAAATTTAT CAAACCCTCA GAGTTGATCG AGCTGGTAGA TAATACAGAT
CTTATCTGCA AAGACGCTGT TGGAATAACC TATAACCCAC TAACAGGCAT TTTTAAGTAC
ACCCCAAGGG TTGATGTCAA TTATATGATT GCAACCCAGA AGGTTGATTA A
|
|---|
| Protein sequence | MQHNTNVDPQ EIAKFERMAE TWWDLNGEFK PLHLLNPLRL NYIDQTAGGI FGKKVLDVGC
GGGILSESMA RIGAEVDGLD MGEEPLEVAR LHALETGVNI TYVKNTAEAH SQDHQGYYDV
VTCMEMLEHV PNPQSVIKAC CDMVKPGGFV FFSTINRNLR SYVETILGAE YLLKMLPVGT
HDHNKFIKPS ELIELVDNTD LICKDAVGIT YNPLTGIFKY TPRVDVNYMI ATQKVD
|
|---|
| |