Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2067 |
Symbol | araD |
ID | 5079493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2362240 |
End bp | 2362935 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499229 |
Product | L-ribulose-5-phosphate 4-epimerase |
Protein accession | YP_001183587 |
Protein GI | 146293163 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000421715 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATTTA TAGAACTTAA ACGCGAAGTT TATGAAGCCA ATATGGAGCT CGAAAAGCGT CATTTAGTGA CCTATACCTT TGGCAATGTG TCACAAATTG ATCGCAAGCG TGGTGTCATC GGTATTAAGC CCAGCGGCGT ACCCTACGAA GATCTTAAGG TTGAAGATAT CGTTATCGTC GATCTTGAAA ACCACATCGT CGAGGGGCGT TTACGTCCAT CATCTGACAC TAAAACCCAC ACTTACTTGT ATCGCCAGTG GGAAAGTATT GGGGGCATTA CCCATACGCA TTCCACCTAT GCCACCGCAT GGGCACAGGC GCAAATTGCA ATCCCTTGTT TTGGTACCAC TCAAGCCGAT TATGTTTACG GCGAGATCCC CTGTACAGCT GTGATGCGTG ATGACCAAAT TAGTCGCGAC TACGAAGAAG AAACCGGTGT ACAGATTCTC GATTGTTTTG CTGATAGAAA CCCGAGTGAG TCACCTATGG TCATTGTGGC AGGGCATGCA CCATTTACGT GGGGAGACAG TGCCGCCAAA TCTGTTTACC ACGCCGTTCT GCTTGAAGAA ATTGCCAGAA TGGCATACCT CACTAAGACA TTGTCACCGA ATATAGCATC ATTAAAACAA GAACTTATAG ATAAGCACTA TCTGCGTAAG CACGGCAAAG ATGCTTACTA TGGTCAAGAC AAATAA
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Protein sequence | MSFIELKREV YEANMELEKR HLVTYTFGNV SQIDRKRGVI GIKPSGVPYE DLKVEDIVIV DLENHIVEGR LRPSSDTKTH TYLYRQWESI GGITHTHSTY ATAWAQAQIA IPCFGTTQAD YVYGEIPCTA VMRDDQISRD YEEETGVQIL DCFADRNPSE SPMVIVAGHA PFTWGDSAAK SVYHAVLLEE IARMAYLTKT LSPNIASLKQ ELIDKHYLRK HGKDAYYGQD K
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