| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2062 |
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| Symbol | |
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| ID | 5079488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2356112 |
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| End bp | 2357845 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499224 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001183582 |
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| Protein GI | 146293158 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000158328 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAATA AAAAAACAAA AGCACTTCGT TCCGCAAGCT GGTTTGGTAG CGATGATAAA
AATGGTTTTA TGTATCGTAG TTGGATGAAA AACCAAGGCA TTCCAGAGCA TCACTTTCAC
AACCGGCCTG TTATTGGTAT TTGCAATACG TGGTCGGAGT TAACGCCCTG CAACGGTCAT
CTGCGGGAAT TGGCTGAAAG AGTTAAAAAT GGGATCCGTG AAGCAGGGGG GATCCCAGTG
GAATTTCCAG TATTTTCCAA TGGTGAATCT AATTTACGCC CCAGTGCCAT GTTAACGCGT
AATTTGGCCG CGATGGATAC CGAAGAAGCG ATTCGAGGCA ATCCGATTGA TGGTGTGGTG
CTCTTAGTGG GTTGTGATAA AACAACGCCG GCTTTACTCA TGGGGGCGGC CAGTTGCAAT
TTACCCACCA TAGTCGTGAC GGGTGGGCCT ATGCTAAATG GTAAACATAA AGGGAAAGAT
GTAGGGTCTG GCACTTTAGT CTGGGAACTG CATCAAGAAT ATAAAGCAGG AAATATTAGC
TTGGCTGAGT TTATGAATGC CGAAGCCGAT ATGTCACGTT CAACGGGTAC TTGTAATACC
ATGGGAACGG CATCGACTAT GGCCTGCATG GCAGAAAGTT TAGGCACCAG TTTGCCACAA
AATGCGGCTA TTCCTGCTGT TGATTCAAGA CGTTATGTCT TAGCCCATAT GTCTGGAATG
CGTATTGTCG ATATGGTCCA TGAGGATTTA ACGCTTTCAA AAGTGCTCAC GCGTGAAGCA
TTTATCAATG CGATAAAAAC CAATGCGGCG ATTGGCGGCT CGACCAATGC GGTTATCCAC
TTAAAAGCCA TAGCGGGGCG CATAGGGGTT GATTTGTCAC TGGATGATTG GTCGTATGGC
TATGATGTAC CGACGATAGT CAATCTTAAG CCCTCGGGTC AGTATTTGAT GGAGGATTTT
TACTATGCAG GAGGTTTACC CGCTGTGCTA AAAGAACTCT TTAACCATCA TTTATTGAGT
AAAAATACCT TAACAGTGAA TGGGAAAACG CTCTGGGAAA ATGTGGCAAA TGCACCTTGT
TACAACCGAG ACGTGATCAT GAGTATTGAT ACACCCTTAG TTGAAAATGG TGGGATCAGA
GTATTAAAGG GGAACTTGGC CCCTCGAGGT GCAGTGATTA AACCTTCTGC AGCCAGTCCG
CATTTAATGA AACATCGTGG TAAAGCGGTC GTGTTTGAGA GTTTTGATGA TTACAACGCC
CGCATAAATG ATCCCGAACT TGCGATTGAT GAAACGAGCA TCATGGTGCT CAAAAATTGC
GGCCCGAAGG GATATCCGGG TATGGCCGAG GTCGGCAATA TGGGATTGCC ACCTAAGCTG
TTAAAAAAAG GGATTAAAGA TATGGTTAGG ATTTCGGATG CGCGAATGAG TGGTACTGCA
TTTGGGACAG TCGTATTGCA TGTTGTCCCC GAGTCACAGG ACTTAGGCCC ACTAGCTGCG
GTACAAAATG GTGATGTGAT CGCACTCGAT ACTTTTGCTG GCGTACTGCA ACTAGAGATT
AGTGACGAAG AATTAGCGGA TCGGTTAGCA AAAATCGCCT TGGTTAAGCA ACTTCCTGTC
AGCAGTGGTT ATTTATCCCT TTTTAGGGAA AGAGTGTTGC AGGCCGATGA AGGGTGTGAT
TTTGATTTTC TAGTGGGATG TCGGGGTGCT GATATTCCGG CACATTCCCA TTAA
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| Protein sequence | MQNKKTKALR SASWFGSDDK NGFMYRSWMK NQGIPEHHFH NRPVIGICNT WSELTPCNGH
LRELAERVKN GIREAGGIPV EFPVFSNGES NLRPSAMLTR NLAAMDTEEA IRGNPIDGVV
LLVGCDKTTP ALLMGAASCN LPTIVVTGGP MLNGKHKGKD VGSGTLVWEL HQEYKAGNIS
LAEFMNAEAD MSRSTGTCNT MGTASTMACM AESLGTSLPQ NAAIPAVDSR RYVLAHMSGM
RIVDMVHEDL TLSKVLTREA FINAIKTNAA IGGSTNAVIH LKAIAGRIGV DLSLDDWSYG
YDVPTIVNLK PSGQYLMEDF YYAGGLPAVL KELFNHHLLS KNTLTVNGKT LWENVANAPC
YNRDVIMSID TPLVENGGIR VLKGNLAPRG AVIKPSAASP HLMKHRGKAV VFESFDDYNA
RINDPELAID ETSIMVLKNC GPKGYPGMAE VGNMGLPPKL LKKGIKDMVR ISDARMSGTA
FGTVVLHVVP ESQDLGPLAA VQNGDVIALD TFAGVLQLEI SDEELADRLA KIALVKQLPV
SSGYLSLFRE RVLQADEGCD FDFLVGCRGA DIPAHSH
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