| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2059 |
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| Symbol | |
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| ID | 5079485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2353059 |
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| End bp | 2354000 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499221 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001183579 |
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| Protein GI | 146293155 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAT ATACATTAGT TTCAGTATTC AGTTTATGGG CGATAGGAGC CAGTTGCGCC
TTTGCGACCA CGGTAGGTTT TTCGCAGGTG GGCTCAGAAA GTGGCTGGCG AACCAGTTTT
AGTGAGGCGG TAAAAGCGGA AGCCAAACAA CGGGGAATAG ACTTAAAGTT TGCCGATGCT
CAGCAAAAAC AAGAGAACCA AATCAAGGCT GTACGTAGCT TTATTGCTCA AGGCGTCGAT
GCGATTATTA TCGCGCCCGT CGTTGAAACG GGTTGGAAGC CTGTCCTTAA GGAAGCCAAG
CGAGCAAATA TCCCCGTTGT GATTGTTGAC CGTAATATTA AGGTCGATGA TGACTCACTG
TTTCTCACCC GTATTGCTTC TGACTTTACC GAAGAAGGCC GCAAAATAGC GCAGTGGTTA
ATGGATAAAA CCCAAGGTAA CTGTGCGATT GCCGAGTTAC AGGGCACAGT TGGTGCGACT
GCCGCTATCG ATCGCGCTGC AGGTTTTAAT GCCGTCATTG CTAATTACCC GAATGCCAAC
ATTGTGCGTA GTCAAACTGG GGAATTTACC CGCGCTAAGG GTAAAGAAGT GATGGAGGGT
TTTCTAAAAG CACAGAATGG TCAAGCACTG TGCGCCGTTT GGTCACATAA CGATGAAATG
GCATTAGGTG CAGTGCAAGC CATTAAAGAA GCCGGATTTA AGCCGGGTAA AGATATCTTA
ATTGTCTCTG TTGATGGGGT GCCTGATTAC TTCAAAGCAA TGGCGGATGG TGACGTTAAT
GCAACGGTCG AATTGAGTCC ATATTTGGGT GGTCCCGCCT TTGATGCGAT TGATGCGTTT
CTTAAGGAAA ATAAAGATCT ACCTAAGCTT ATCAGTACAA CAGGTGATGT ATTCACTCAA
GAAACCGCAG CAGCCGAATA TGAAAAACGT CGTCTGCAAT AA
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| Protein sequence | MTKYTLVSVF SLWAIGASCA FATTVGFSQV GSESGWRTSF SEAVKAEAKQ RGIDLKFADA
QQKQENQIKA VRSFIAQGVD AIIIAPVVET GWKPVLKEAK RANIPVVIVD RNIKVDDDSL
FLTRIASDFT EEGRKIAQWL MDKTQGNCAI AELQGTVGAT AAIDRAAGFN AVIANYPNAN
IVRSQTGEFT RAKGKEVMEG FLKAQNGQAL CAVWSHNDEM ALGAVQAIKE AGFKPGKDIL
IVSVDGVPDY FKAMADGDVN ATVELSPYLG GPAFDAIDAF LKENKDLPKL ISTTGDVFTQ
ETAAAEYEKR RLQ
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