| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2056 |
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| Symbol | |
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| ID | 5079482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2349448 |
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| End bp | 2350410 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640499218 |
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| Product | inner membrane ABC transporter permease protein YjfF |
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| Protein accession | YP_001183576 |
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| Protein GI | 146293152 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTCTA AGCGTTTTAT TCCATTGTGG ATCACGGCCT CCTTGCTGTT GGTCATGTTC
CTGATAGGGT CGCTACAATT TGAGGGTTTT GCCAGCGTTC GAGTGGTGAC TAACCTATTC
CGTGATAATG CTTTTCTATT GATCACTGCA CTTGGGATGA CCCTCGTGAT TATCTCGGGG
GGGATTGATC TCTCCGTCGG CGCTGTGATT GCTTTAAGTG GTGTACTCAG TAGTGTGTTA
ATTACGCAAT ATCAGTGGCA TCCTTTGCTC GCTTTTGCAC TTATCTTACC CTTAGGCACG
CTCTTTGGCG CACTGATGGG CACGATCATT CATGTCTATA AGTTGCAGCC TTTTATTGTG
ACCCTTGCGG GGATGTTTCT TGCCCGTGGT ATTGCGACAA CAGTAAGTGA AGAGTCGATA
GCGATTGATC ATCCATTTTA TGATGCGATT GCCGACCTGA GCATCGCTTT ACCAGGTAAT
GGTTCACTCG ATATCAGTTC GCTGATTTTT ATTGTTTTTT TTGCCATTAT CGCCACCATG
ATGCACTACA GTCGTTTTGG TACAAATGTG TATGCCCTCG GTGGTAATGC GCAGTCTGCC
GAGTTAATGG GGGTTTCGAT TGCAAAAACC ACCATTAGCA TTTACGCCCT TAGCAGTTTT
CTCGCCACTT TGGCGGGGAT TATTTTCACC TTCTATACCT TTTCTGGTTA TTCCCTTGGG
GCGGTTGGCG TAGAACTTGA CGCTATTGCT GCCGTGGTGA TTGGGGGGAC ATTACTTACT
GGCGGGAGTG GTTTTATATT AGGTACTGTA CTTGGGGTGT TTTTGATGGG AGTTATCCAA
ACCTACATCA CCTTTGACGG TACACTCAGT AGTTGGTGGA CCAAGATAGT AATTGGCTTA
TTGCTATTTT TCTTCATCGT GTTACAGAAA CTCTTGAATG GATGCAAAGC TAATCATGGA
TAA
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| Protein sequence | MMSKRFIPLW ITASLLLVMF LIGSLQFEGF ASVRVVTNLF RDNAFLLITA LGMTLVIISG
GIDLSVGAVI ALSGVLSSVL ITQYQWHPLL AFALILPLGT LFGALMGTII HVYKLQPFIV
TLAGMFLARG IATTVSEESI AIDHPFYDAI ADLSIALPGN GSLDISSLIF IVFFAIIATM
MHYSRFGTNV YALGGNAQSA ELMGVSIAKT TISIYALSSF LATLAGIIFT FYTFSGYSLG
AVGVELDAIA AVVIGGTLLT GGSGFILGTV LGVFLMGVIQ TYITFDGTLS SWWTKIVIGL
LLFFFIVLQK LLNGCKANHG
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