Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2055 |
Symbol | |
ID | 5079481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2348364 |
End bp | 2349473 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640499217 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_001183575 |
Protein GI | 146293151 |
COG category | [R] General function prediction only |
COG ID | [COG3940] Predicted beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCAA AGCTAATCAT GGATAATATA ATCTCGAAAA CTAACGCAAA ATTAGGTCTG TTATCAGCCT TTATTACCTC GATGCTGTTG CCTGTGTGTG CAGCGAGTTC CTCGCCCGTT CTAGCGCTTC CAGCTTCTCA AACTAGCGTG ACGTCAAGTG CAGTTCAATA TGCCCCTTTT ATTGAGCGCC GCGCGGATCC TTGGGTTATA AAAGATGATG ATGGGAGCTA TTACTTTATC GCATCTGTAC CCGAGTTTGA TCGGATAGAG CTTCGTCATG CCGCAAATAT TAAAGGATTA AGTCAAGCTA TCCCCAAAAT TATTTGGCGT AAGCATACAT CAGGGCCAAT GAGTATCGAC ATTTGGGCGC CAGAACTGCA TAAAATTGAT GGTCGCTGGT ATATCTATTA TGCTGCCAGT GATAAAGACA GACGCTTTCA TAACCGCATG TTTGTATTGG GGCTTGAAGG TGACAACCCC ATGAAGGGCG ATTGGCAAGA GCTTGGCCGT TTAAAAACCG CAAGGGATGG ATTTTCCTTA GATGCCACCC ACTTTAGTGT TGGCGGGCAG GGCTATTTTA TTTGGGCGCA GCAGGACGAT GCCAAAAGCT ACAATACGGG ACTGGTGATT GCCAAAATGC TGTCACCTAC AGCGGCATCA CCACAAGAAG CAATCATCAG TGAGCCTTTG CTGGATTGGG AAAGGCAAGG CTTTAAAGTT AATGAAGGCG CTGCGGTATT GGTGAAAAAT GGGAAGGTAT TTGTCACTTA TTCTGCCAGT GCAACAGATG ATCGTTATGC GATGGGACTC CTTTGGGCGG AGCAAGATGC AGATCTGCTC GACCCCAAAA ATTGGCATAA AGTTTCTGAG CCTGTTTTTA GCACAGAGCC TACACTTAAT CGCTTTGGTC CTGGACATAA CAGCTTTGTG CTTGCCGAAG ATGGTCAAAC CGAGTTGATG TTTTACCATG CTCGCAATTA CCTTGAACTT CAAGGCACGC CATTAACCGA TGGTAATCGC CATACTTACT ACCGCGCTAT CTCATGGACA GAGAATGGAT TCCCTGTATT TCACAATCAG CTGGCAGATA ATGTGGTCGA TATAAAATAA
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Protein sequence | MDAKLIMDNI ISKTNAKLGL LSAFITSMLL PVCAASSSPV LALPASQTSV TSSAVQYAPF IERRADPWVI KDDDGSYYFI ASVPEFDRIE LRHAANIKGL SQAIPKIIWR KHTSGPMSID IWAPELHKID GRWYIYYAAS DKDRRFHNRM FVLGLEGDNP MKGDWQELGR LKTARDGFSL DATHFSVGGQ GYFIWAQQDD AKSYNTGLVI AKMLSPTAAS PQEAIISEPL LDWERQGFKV NEGAAVLVKN GKVFVTYSAS ATDDRYAMGL LWAEQDADLL DPKNWHKVSE PVFSTEPTLN RFGPGHNSFV LAEDGQTELM FYHARNYLEL QGTPLTDGNR HTYYRAISWT ENGFPVFHNQ LADNVVDIK
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