| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2044 |
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| Symbol | |
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| ID | 5079470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2328887 |
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| End bp | 2330167 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640499206 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001183564 |
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| Protein GI | 146293140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000150109 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAAT TACGTCTTGA ACCTGTTGTG CAAGTCCGCG GTGAAATCAA TATTCCGGGC
TCAAAAAGTA TTTCAAATCG AGCCTTATTA TTGGCCACCT TAGCCCAAGG TACGACCACG
CTCACCAATC TGCTCGACTC AGATGATATT CGCCACATGT TGGCCTCCCT CAAGCAGTTA
GGGGTGAACT ACCGTTTATC GCAAAACAAT ACTGTGTGTG AACTCGATGG CATAGGCGGT
GTGATTTCCT CTGCATCCGC ACAGGAATTG TTTTTAGGCA ATGCGGGTAC CGCAATGCGC
CCCTTATGCG CCGCCTTAAC CTTAGGCCAA GGTGAATTTA CCCTCACGGG CGAGCCACGT
ATGGAAGAGC GTCCGATTGG CGATTTAGTC GATGCCTTAA GGCAACTCGG TGCCAATATT
GTTTATCTTA AAAATGACGG TTTCCCGCCA CTGACGATTA ATGCCACTGG CCTTAATGGC
GGCGATGTCG AAATCGCAGG CGATTTATCG AGCCAGTTTT TAACGGCCTT ATTGATGGTG
GCACCGCTTG CTAAGGGCAG CGTCAATATC CATGTCAAAG GCGAGTTAGT CTCTAAGCCT
TATATCGATA TCACTATTGC CTTGATGGCG CAGTTTGGCG TTAACGTCAT TAACCATGAT
TATGCCCGTT TTGAGATTGT TGCAGGCCAG CGTTATATAT CACCGGGTAA AGTACTGGTA
GAAGGCGATG CGTCATCGGC ATCGTATTTC CTCGCGGCAG GGGCGATTAA GGGTGGCGAG
GTCAAAGTCA CAGGTGTGGG CCGTTTGAGT ATCCAAGGCG ATGTGAAATT TGCCGATGTG
CTCGAAAAAA TGGGCGCAGA TATCGAGTGG GGCGATGACT ATATTATCGC CCGCGGCTCA
CCTTTAACGG CCGTCGACTT AGACATGAAC CATATTCCCG ATGCGGCCAT GACCATTGCA
ACTGCTGCGT TATTTGCCAA AGGCACAACG GTTATTCGCA ATATCTACAA CTGGCGCATT
AAAGAAACCG ACCGGTTAGC GGCCATGGCG ACCGAATTAC GCAAAGTGGG CGCCGAAGTT
GAAGAGGGCA ATGATTACAT TAAAATCACT CCACCGGCGG TGATTAACAC CGCTGAAATC
GATACCTACA ACGATCATCG CATGGCCATG TGCTTTTCTA TGTTGGCATT TGCCGATTGC
GGTATCACCA TCAATGATCC TGACTGTACT TCCAAAACAT TCCCTGACTA CTTTAAGCAG
TTTGCGAGCT TGCAAGGTTA A
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| Protein sequence | MKQLRLEPVV QVRGEINIPG SKSISNRALL LATLAQGTTT LTNLLDSDDI RHMLASLKQL
GVNYRLSQNN TVCELDGIGG VISSASAQEL FLGNAGTAMR PLCAALTLGQ GEFTLTGEPR
MEERPIGDLV DALRQLGANI VYLKNDGFPP LTINATGLNG GDVEIAGDLS SQFLTALLMV
APLAKGSVNI HVKGELVSKP YIDITIALMA QFGVNVINHD YARFEIVAGQ RYISPGKVLV
EGDASSASYF LAAGAIKGGE VKVTGVGRLS IQGDVKFADV LEKMGADIEW GDDYIIARGS
PLTAVDLDMN HIPDAAMTIA TAALFAKGTT VIRNIYNWRI KETDRLAAMA TELRKVGAEV
EEGNDYIKIT PPAVINTAEI DTYNDHRMAM CFSMLAFADC GITINDPDCT SKTFPDYFKQ
FASLQG
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