| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2042 |
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| Symbol | rpsA |
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| ID | 5079468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2326238 |
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| End bp | 2327905 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499204 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001183562 |
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| Protein GI | 146293138 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000389287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTGA TCTATTTGAA CAATCCCTTC AAACTCTGGA ATTCCGTCCA
GGTTCTATCG TTCGTGGTAC TGTTGTTGCT ATCGAAAACG GTATGGTCCT TGTTGACGCA
GGTCTGAAGT CTGAAAGCCC AATCCCAGCT GAGCAATTCA AAAACGCCCA AGGCGTTTTA
GAAATTCAAG TTGGTGATGA AGTTGACGTA GCTCTTGACT CTGTTGAAGA CGGCTTCGGT
GAGACTCAAT TGTCTCGCGA AAAAGCGAAA CGTCATGAAG CTTGGATCGT TCTGGAAAAA
GCTTACGAAG ATGCTGAAAC TGTAATCGGT ATCATCAATG GTAAAGTGAA AGGCGGTTTC
ACTGTTGAAT TAAACGGTAT CCGTGCCTTC TTACCAGGTT CTCTAGTTGA CGTGCGCCCA
GTTCGCGACA CCGCTCACTT AGAGTACAAA GAATTAGAAT TCAAAGTTAT CAAACTAGAC
CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCAGA AAGCAGCGCT
GAGCGTGATG CACTGTTAGA AAACCTGCAA GAAGGTCAAG CAGTTAAAGG TATCGTTAAG
AACCTGACTG ACTACGGTGC ATTCGTAGAT TTAGGTGGCG TTGACGGTCT ATTACATATC
ACTGATATGG CGTGGAAACG TGTTAAACAT CCATCTGAAA TCGTCAATGT TGGCGATGAA
ATCAACGTTA AAGTACTGAA GTACGATCGT GAGCGCACTC GTGTGTCTCT AGGTCTGAAA
CAACTTGGCG AAGATCCATG GTTAGAAATC AGCAAACGCT ACCCAGAAAA CACACGTTTA
ACTGGTCGCG TAACTAACCT AACTGACTAC GGTTGCTTCG TCGAAATCGA AGAAGGCGTT
GAAGGTCTGG TTCACGTTTC TGAAATGGAT TGGACTAACA AGAACATTCA CCCATCTAAA
GTGGTTAACT TAGGTGATGA AGTTGAAGTT CTGGTTCTGG ACATCGATGA AGAGCGTCGT
CGTATCTCTC TTGGTCTGAA ACAATGTAAG ACCAACCCAT GGGATGACTT CGCAACTCGT
TACAACAAAG GCGACAAGGT TTCTGGTAAG ATCAAGTCAA TCACTGACTT CGGTATCTTT
ATCGGTCTTG ACGGCGGTAT CGATGGCCTA GTTCACTTGT CTGACATTTC TTGGAACGGT
ACTGGCGAAG ACGCAGTTTC TGAATACAAG AAAGGCGACG AAATCCACGC AGTGGTTCTG
TCTGTTGATC CAGAGCGTGA GCGCATCAGC TTAGGTGTTA AACAAACTGA AGACGATCCA
TTCAACGCTT ACTTAGCTGA TAAGAAGAAA GGTACTATCG TACACGGTAC TGTTTCTGCT
GTTGATGCTA AAGGTGTCAC TGTTGAACTG GCTGACACTG TTGAAGGTTA CATCCGTGTA
GCTGACATCA GCCGTGAGCG CATCGAAGAT GCATCTACTG TCTACAATGT AGGTGATGCA
ATCGAAGCTA AGTTCATGGG TGTTGACCGT AAGAACCGCT CTATCAGCCT GTCAATCAAA
GCGAAAGACG AAGCTGAAGA GAAAGAAGTA ATGGCGACCT TGAATAAACA AGAAGACGCT
GTTATTAGTA ATGCTATGGC TGAAGCGTTT AAAGCAGCTC GCAAATAA
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| Protein sequence | MTESFADLFE QSLQTLEFRP GSIVRGTVVA IENGMVLVDA GLKSESPIPA EQFKNAQGVL
EIQVGDEVDV ALDSVEDGFG ETQLSREKAK RHEAWIVLEK AYEDAETVIG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTAHLEYK ELEFKVIKLD QKRNNVVVSR RAVIESESSA
ERDALLENLQ EGQAVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
INVKVLKYDR ERTRVSLGLK QLGEDPWLEI SKRYPENTRL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNLGDEVEV LVLDIDEERR RISLGLKQCK TNPWDDFATR
YNKGDKVSGK IKSITDFGIF IGLDGGIDGL VHLSDISWNG TGEDAVSEYK KGDEIHAVVL
SVDPERERIS LGVKQTEDDP FNAYLADKKK GTIVHGTVSA VDAKGVTVEL ADTVEGYIRV
ADISRERIED ASTVYNVGDA IEAKFMGVDR KNRSISLSIK AKDEAEEKEV MATLNKQEDA
VISNAMAEAF KAARK
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