Gene Sputcn32_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2042 
SymbolrpsA 
ID5079468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2326238 
End bp2327905 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content44% 
IMG OID640499204 
Product30S ribosomal protein S1 
Protein accessionYP_001183562 
Protein GI146293138 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000389287 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT CTTTTGCTGA TCTATTTGAA CAATCCCTTC AAACTCTGGA ATTCCGTCCA 
GGTTCTATCG TTCGTGGTAC TGTTGTTGCT ATCGAAAACG GTATGGTCCT TGTTGACGCA
GGTCTGAAGT CTGAAAGCCC AATCCCAGCT GAGCAATTCA AAAACGCCCA AGGCGTTTTA
GAAATTCAAG TTGGTGATGA AGTTGACGTA GCTCTTGACT CTGTTGAAGA CGGCTTCGGT
GAGACTCAAT TGTCTCGCGA AAAAGCGAAA CGTCATGAAG CTTGGATCGT TCTGGAAAAA
GCTTACGAAG ATGCTGAAAC TGTAATCGGT ATCATCAATG GTAAAGTGAA AGGCGGTTTC
ACTGTTGAAT TAAACGGTAT CCGTGCCTTC TTACCAGGTT CTCTAGTTGA CGTGCGCCCA
GTTCGCGACA CCGCTCACTT AGAGTACAAA GAATTAGAAT TCAAAGTTAT CAAACTAGAC
CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCAGA AAGCAGCGCT
GAGCGTGATG CACTGTTAGA AAACCTGCAA GAAGGTCAAG CAGTTAAAGG TATCGTTAAG
AACCTGACTG ACTACGGTGC ATTCGTAGAT TTAGGTGGCG TTGACGGTCT ATTACATATC
ACTGATATGG CGTGGAAACG TGTTAAACAT CCATCTGAAA TCGTCAATGT TGGCGATGAA
ATCAACGTTA AAGTACTGAA GTACGATCGT GAGCGCACTC GTGTGTCTCT AGGTCTGAAA
CAACTTGGCG AAGATCCATG GTTAGAAATC AGCAAACGCT ACCCAGAAAA CACACGTTTA
ACTGGTCGCG TAACTAACCT AACTGACTAC GGTTGCTTCG TCGAAATCGA AGAAGGCGTT
GAAGGTCTGG TTCACGTTTC TGAAATGGAT TGGACTAACA AGAACATTCA CCCATCTAAA
GTGGTTAACT TAGGTGATGA AGTTGAAGTT CTGGTTCTGG ACATCGATGA AGAGCGTCGT
CGTATCTCTC TTGGTCTGAA ACAATGTAAG ACCAACCCAT GGGATGACTT CGCAACTCGT
TACAACAAAG GCGACAAGGT TTCTGGTAAG ATCAAGTCAA TCACTGACTT CGGTATCTTT
ATCGGTCTTG ACGGCGGTAT CGATGGCCTA GTTCACTTGT CTGACATTTC TTGGAACGGT
ACTGGCGAAG ACGCAGTTTC TGAATACAAG AAAGGCGACG AAATCCACGC AGTGGTTCTG
TCTGTTGATC CAGAGCGTGA GCGCATCAGC TTAGGTGTTA AACAAACTGA AGACGATCCA
TTCAACGCTT ACTTAGCTGA TAAGAAGAAA GGTACTATCG TACACGGTAC TGTTTCTGCT
GTTGATGCTA AAGGTGTCAC TGTTGAACTG GCTGACACTG TTGAAGGTTA CATCCGTGTA
GCTGACATCA GCCGTGAGCG CATCGAAGAT GCATCTACTG TCTACAATGT AGGTGATGCA
ATCGAAGCTA AGTTCATGGG TGTTGACCGT AAGAACCGCT CTATCAGCCT GTCAATCAAA
GCGAAAGACG AAGCTGAAGA GAAAGAAGTA ATGGCGACCT TGAATAAACA AGAAGACGCT
GTTATTAGTA ATGCTATGGC TGAAGCGTTT AAAGCAGCTC GCAAATAA
 
Protein sequence
MTESFADLFE QSLQTLEFRP GSIVRGTVVA IENGMVLVDA GLKSESPIPA EQFKNAQGVL 
EIQVGDEVDV ALDSVEDGFG ETQLSREKAK RHEAWIVLEK AYEDAETVIG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTAHLEYK ELEFKVIKLD QKRNNVVVSR RAVIESESSA
ERDALLENLQ EGQAVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
INVKVLKYDR ERTRVSLGLK QLGEDPWLEI SKRYPENTRL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNLGDEVEV LVLDIDEERR RISLGLKQCK TNPWDDFATR
YNKGDKVSGK IKSITDFGIF IGLDGGIDGL VHLSDISWNG TGEDAVSEYK KGDEIHAVVL
SVDPERERIS LGVKQTEDDP FNAYLADKKK GTIVHGTVSA VDAKGVTVEL ADTVEGYIRV
ADISRERIED ASTVYNVGDA IEAKFMGVDR KNRSISLSIK AKDEAEEKEV MATLNKQEDA
VISNAMAEAF KAARK