| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2038 |
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| Symbol | |
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| ID | 5079464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2323574 |
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| End bp | 2324269 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499200 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001183558 |
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| Protein GI | 146293134 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000333047 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACTA AACCTATCCT CGTAGCACTT GATTACGATA ATAAAAGCCA CGCGTTGCAA
CTCATAGATC AACTCGATCC CAACATGTGC CGCCTTAAAA TTGGCAAAGA AATGTTTACC
CTATTTGGGC CTCAGCTCGT TAAGGATATC CATGATCGTG GCTTCGATTT ATTCCTAGAT
TTAAAATTCC ACGACATTCC AAATACAGTC GCTAAAGCCG TGGCCGCTGC CGCTGATCTA
GGGGTATGGA TGACGAACGT GCATGCCAGT GGTGGTTTAG CCATGATGGA AGCGGCAAAA
AAAGCGTTGT TGCCATACGG TGACAAAGCG CCAATGCTGA TTGCTGTGAC GGTATTAACC
TCCATGAGTG ATGATGATCT TAAATTAATC GGCATCAATG TGCCTGCCTT TGAACATGTT
CAGCGTTTAG CTAAATTGAC GAAACAGGCT GGTCTTGATG GTGTTGTTTG TTCAGCGCAA
GAAGCAAAGG CACTTAAAAC GTTATTAGGT CAAGACTTTA AACTCATTAC ACCAGGCATT
CGTCCTGTGG GTAGCGAGGT TGGCGACCAA CATCGGGTGA TGACACCGGC TGCGGCGATA
GCCGCCGGGT CAGATTATTT GGTGGTTGGC CGCCCCATTA CTAAAGCCGT CGATCCATTA
GCGGCCTTGC AAGCGATTTA TCAATCATTG GCATAG
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| Protein sequence | MTTKPILVAL DYDNKSHALQ LIDQLDPNMC RLKIGKEMFT LFGPQLVKDI HDRGFDLFLD
LKFHDIPNTV AKAVAAAADL GVWMTNVHAS GGLAMMEAAK KALLPYGDKA PMLIAVTVLT
SMSDDDLKLI GINVPAFEHV QRLAKLTKQA GLDGVVCSAQ EAKALKTLLG QDFKLITPGI
RPVGSEVGDQ HRVMTPAAAI AAGSDYLVVG RPITKAVDPL AALQAIYQSL A
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