| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2037 |
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| Symbol | |
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| ID | 5079463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2322701 |
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| End bp | 2323522 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640499199 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001183557 |
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| Protein GI | 146293133 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0153445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATG CTACGATGTT TAACTATCAA GGTAAGAATG TTGTCGTTGT CGGAGGAACC
AGTGGAATAA ATCTCGCGAT TGCCATTGCG TTCGCACAAG CTGGTGCCAA TGTGGCCGTC
GCGAGCCGCA GCCAAGATAA AATCGATGCC GCAGTATTGC AGCTACAGCA AGTCAATCCA
GAGGGGATTC ATTTAGGAGT GAGTTTTGAT GTGCGCGATC TTAGCGCCCT TGAAATTGGT
TTTGATAAAA TCGCTTCTGA ATTTGGTTTT ATCGATGTGC TTGTCAGCGG CGCGGCGGGT
AATTTTCCTG CAACAGCGGC TAAGCTTTCA GCTAATGGCT TTAAGTCGGT GATGGACATC
GATTTGCTGG GCAGTTTTCA AGTGCTAAAA CAGGCTTATC CTTTGCTACG TCGTCCTAAT
GGCAATATTA TTCAAATCTC TGCGCCACAG GCTTTTATTG CAATGCCAAT GCAAGTACAT
GTTTGTGCAG CAAAAGCTGG CGTGGATATG TTAACGCGAA CCTTAGCTAT TGAGTGGGGT
TGTGAAGATT TACGAATAAA CTCTATCGTA CCAGGTCCGA TTGCTGAGAC CGAAGGTTTT
AATCGTCTTG CACCGAGTGC TGCATTGCAG CAAAGCGTTG CTCAATCTGT ACCCTTAAAG
CGTAATGGCA CGGGACAGGA TATTGCTAAT GCGGCCTTAT TTTTAGGCTC TGAATTAGCC
TCCTATATCA CAGGCGTTGT TCTGCCAGTT GATGGTGGTT GGTCACTCGG TGGAGCGAGT
ATTGCGATGA CAGAGTTGAG TGAACGGGCT GCAAAAATGT AG
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| Protein sequence | MFNATMFNYQ GKNVVVVGGT SGINLAIAIA FAQAGANVAV ASRSQDKIDA AVLQLQQVNP
EGIHLGVSFD VRDLSALEIG FDKIASEFGF IDVLVSGAAG NFPATAAKLS ANGFKSVMDI
DLLGSFQVLK QAYPLLRRPN GNIIQISAPQ AFIAMPMQVH VCAAKAGVDM LTRTLAIEWG
CEDLRINSIV PGPIAETEGF NRLAPSAALQ QSVAQSVPLK RNGTGQDIAN AALFLGSELA
SYITGVVLPV DGGWSLGGAS IAMTELSERA AKM
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