| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2034 |
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| Symbol | |
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| ID | 5079460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2318536 |
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| End bp | 2320050 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640499196 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001183554 |
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| Protein GI | 146293130 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.242187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGT TATCTAAAAC AACGTGTTAC ATAGGGTTAA TATTGAGTTT TTTCTCAATA
AGCACTAAGG CTACACAAGC AAATATCCCC AGCATTGAGC CTAGAACTAC AACACTCAGC
CAAAGTATCG CCGATATTAA CCCACGACAT TCACAAACCG CATTATTAGC ATTGGATTTA
GCGAACAATC AGATTCTCTA TAGTCAACAG GCGGATACCC TGTTGGTTCC TGCCAGCACA
CAAAAAATTC TCACAGCAGT CACCGCCATG GCAGAACTTG GGACTGAGTT TCGTTATGTC
ACTGAATTAT GGACCGATGC ACCACTCCGT AATGGCCACA TTGCAGGGAG TGTTTATTTA
CGTTTTAGTG GTGATCCAAC CCTGACACAA TTGGATTTAA AAGCCCTCTT TGCAAGTTTA
GTGAAACAAG GCATTAATGG CATTGATGGT CATTTGTATC TTATTGGGGA TAAACAAGAA
CAATTGCAAG CACCGGGTTG GGTTTGGGAT GATTTAGGCA TCTGCTATGC AGCCCCTGTG
TCGAGCTACA TCATCAACCA AAATTGTGTT TTCGGTCAGT TCATCCCAAG CAATGAAAAA
GAGCCCTCAA AGGTTGTGTT ACGCGCCACC AGTTATGGGG TAAAGGTCAA TAGTGACGCC
GTATTCGATC GACAAGCCAA TCGCGATTTC TGTCAGCTTG ATCTCGTCCG TTTAGGGCAA
AACAACTACC ACTTACGAGG ATGTTATCCA GGATCTGAAG CCATACCTCT CGCAATTGCA
GTAACTGATC CAGCTCAGTT TGCGCAAGAC ACCCTAACAG CCATACTCAA AGCCGAAACA
CCACTTTCGG GTAAAGTACG CATAGGCAAT AGCATCCCTA AAAAAGCCAA ACTGATCGCG
AGCCATAGCT CACAGCCATT GCCTGAACTA CTCAAAACGA TGTTACTTAA ATCGGATAAC
TTAATTGCTG ATAGCTTGTT CAAGCAAATA GGAAAGAGCT ATTACCATAC ACAAGGAAGT
TTTACCCATG GTGCGGCCGC CATGCGCCGT ATTCTTACCG ATTTAGGGGT TGATTTAACG
AATGCAAGTA TTGTCGATGG TTCTGGACTT TCACGATATA ACCTATTGAG TGTTAATCAG
TTAGCATCAG TATTGAAGTT AATTTATGAA GATGATCGCT TTAGAGAATT AATGAACAGT
CTGCCCCAAT CTGGGGTCAG TGGTACACTA AAATACCGAA CAGGTTTCAC TAAACCACCA
TTGAAAAACC TGATTTTTGC CAAAACAGGC TCGATGCAAG GTATTGCAAA CCTAGCAGGA
TTTATGCGAT TACCACAGCA TAAGGATATA TTATTTGTTG TACTCGAAAA TGGCATCAGC
CCAGCGCTTA AAAAGCAAAA TAAGCCCCCT TTTAGCGCAG ACTTTTTAAC TCAATTGATG
ACAAAGCTAG AAGTCAAAGC ATCTCTAACG GAGACTGATA CGATTCAAGC TCATTCCAAG
ATTACCCCTA AGTAA
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| Protein sequence | MDMLSKTTCY IGLILSFFSI STKATQANIP SIEPRTTTLS QSIADINPRH SQTALLALDL
ANNQILYSQQ ADTLLVPAST QKILTAVTAM AELGTEFRYV TELWTDAPLR NGHIAGSVYL
RFSGDPTLTQ LDLKALFASL VKQGINGIDG HLYLIGDKQE QLQAPGWVWD DLGICYAAPV
SSYIINQNCV FGQFIPSNEK EPSKVVLRAT SYGVKVNSDA VFDRQANRDF CQLDLVRLGQ
NNYHLRGCYP GSEAIPLAIA VTDPAQFAQD TLTAILKAET PLSGKVRIGN SIPKKAKLIA
SHSSQPLPEL LKTMLLKSDN LIADSLFKQI GKSYYHTQGS FTHGAAAMRR ILTDLGVDLT
NASIVDGSGL SRYNLLSVNQ LASVLKLIYE DDRFRELMNS LPQSGVSGTL KYRTGFTKPP
LKNLIFAKTG SMQGIANLAG FMRLPQHKDI LFVVLENGIS PALKKQNKPP FSADFLTQLM
TKLEVKASLT ETDTIQAHSK ITPK
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