| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2030 |
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| Symbol | emrD |
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| ID | 5079456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2315052 |
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| End bp | 2316320 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499192 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_001183550 |
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| Protein GI | 146293126 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCCA TTAACTTATG TTCTTTTTAT GGCTATTTCA TGTCTGGCAA AGCTCAACAC
TCTTTCGTGT CAAACTCAGT ATCTCCTTCT GTAAGCCTGA TATTTATGCT GGTATTTATG
GTGGCTTGTG GCCAAATGGC ACAAACCATT TTTGTGCCCG CATTGCCGCA AATTGCCCTC
AGCTTAAATG TAGATGCCAG TCAATTACAG GCTGTGATGG CCTGTTACCT TATTGCATAT
GGATTATTCC AATTTGTATA TGGACCTTTG TCTGACCGTA TTGGGCGTAA AACACCTTTA
CTCATCGGTA TTGGTATTTT TATCTTAGGG GCATTTATGG CCGCACGGGC TCAACATTTC
AATCAACTTA TCTTTGCGAG CTTAATCCAA GGTTTAGGAA CCGCAAGTGC AGGCGCCTTA
TGTCGTAGTA TTCCTCGGGA TCACTATTTT GGTGACAATT TAGTAAAATT TAACAGTTAT
GTCTCTATGG CCGTGGTCTT TCTCCCACTC ATAGCCCCTT TTTTAGGTAG CATAATGACC
GCCTATTTTG GATGGCAAGC TGTCTATTGG GTACTAGCAG GATTTGGCGT ATTTGTGTGG
TTACTATTAT TAGTCGGGTT TAAAGAGTCC CTCCCGTCGT GTAAACGTGA GCATAACCCC
ATCATCGCGT CCTATCGACA TGTACTACGG CATAGAGGAT TTAGAGCCTA TCTGTCTTCA
TTAATTGCCA CATTCGCAGG TATTGCTGCT TTTGAAGCAA TTGCAGGTGT ACTCTACGGT
CAATATTTAG GGCTTCCCCC TTTTATGGTG AGTTGTTACT TTGTGGCTCC TATTCCTGGT
TACTTGTTAG GAGCCTTGAT TGCTGGCAAG CAAACTAAAA CACAACGTAC TGTTTATCAA
GGGGTTGCAC TATTAGGGAC TGGGGCTTTA TTTATGCTTA TCCCTGGGAT ATTCCTGCTC
GTCAGCACAT GGAGTTTACT TGTAGGTTCT GTATTATTTT TTAGTGGTGC AGGTATGCTC
TTTCCTACTC TCACCTCTGC GGCACTGGAA CCGTTTCCGC GTCAAGCGGG TATTGCGGGG
GCATTACTTG GTGGGTTACA GAATTTTGGT GCAGGTCTTG CGGCTCTTAG CATGTCAGTC
ATGCCCATGG GAGGACAATT AAGTATTGGA TTACTGAGTA CTATGATGGT TATCCTTGTG
ATAGCATCAC TTCATTATGC TAAAGACCAA AATGATACCC ATCAAAATCT AATGCCTCAA
AATCAGTAA
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| Protein sequence | MRAINLCSFY GYFMSGKAQH SFVSNSVSPS VSLIFMLVFM VACGQMAQTI FVPALPQIAL
SLNVDASQLQ AVMACYLIAY GLFQFVYGPL SDRIGRKTPL LIGIGIFILG AFMAARAQHF
NQLIFASLIQ GLGTASAGAL CRSIPRDHYF GDNLVKFNSY VSMAVVFLPL IAPFLGSIMT
AYFGWQAVYW VLAGFGVFVW LLLLVGFKES LPSCKREHNP IIASYRHVLR HRGFRAYLSS
LIATFAGIAA FEAIAGVLYG QYLGLPPFMV SCYFVAPIPG YLLGALIAGK QTKTQRTVYQ
GVALLGTGAL FMLIPGIFLL VSTWSLLVGS VLFFSGAGML FPTLTSAALE PFPRQAGIAG
ALLGGLQNFG AGLAALSMSV MPMGGQLSIG LLSTMMVILV IASLHYAKDQ NDTHQNLMPQ
NQ
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