| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2009 |
|---|
| Symbol | |
|---|
| ID | 5078212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2291670 |
|---|
| End bp | 2293001 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640499169 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_001183529 |
|---|
| Protein GI | 146293105 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.107159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAGTC TATCATTTAA TTTTGCCCCT GATTTTCGAC CTCTCGCCGC TCGCATGCGG
CCAAGGTCAA TAGCCGAATA TATTGGTCAA GCTCATTTGT TAGGTGAAGG TCAACCCCTG
CGTAAAGCAT TGGAAGCTGG GCGTGCTCAT TCCATGATGT TGTGGGGGCC ACCAGGGACA
GGCAAAACAA CGCTCGCTGA ATTAATTGCC CAGTATTCTA ATGCACATGT TGAGCGTATT
TCAGCGGTCA CCTCTGGCGT AAAAGAGATT CGTGCGGCCA TTGAACAGGC AAAAGCTATT
GCGGAATCCC GTGGACAACG TACCTTATTG TTTGTCGATG AAGTCCATCG CTTTAATAAA
AGTCAGCAGG ATGCTTTTTT GCCCTTTATT GAAGATGGCA CAGTGATTTT TATCGGCGCC
ACTACCGAAA ATCCCTCGTT TGAAATCAAC AATGCCTTAC TTTCGCGGGC GAGAGTTTAT
CTTATCAAGC GCTTAAGTAA TAATGAGATA GCGCATATCG TGACCCAAGC CTTGGCCGAT
ACTGAGCGTG GCCTTGGTCT GCGGCAACTC GAAATGCCTG AGAGTGTGCT CATCAAACTT
GCTCAACTTT GTGATGGTGA TGCGCGTAAG GCGCTCAACT TACTCGAGTT AATGAGTGAT
ATGGTAAGTG ATAACGACAC TTTTACCCTT GAAATGCTCG TGCAAGTGGC GGGACACCAA
GTTGCCGGAT TCGATAAAAA TGGCGATCAA TTTTACGATT TGATTTCTGC GGTACATAAA
TCCATTCGTG GCTCGGCACC CGATGCCGCA CTTTACTGGT ATTGCAGGAT TTTAGAAGGT
GGTGGCGATC CACTCTATGT TGCAAGGCGA CTACTTGCGA TCGCTTCTGA AGATGTGGGC
AATGCCGATC CTGCTGCAAT GACAATTGCG CTCAATGCTT GGGATTGTTT TCATCGCGTT
GGACCTGCAG AAGGTGAGAG GGCGATTGCA CAGGCCATAG TGTATCTGGC GAGCGCTCCT
AAAAGTAATG CTGTATATAC TGCATTTAAA GCGGCTAGGG CACTGGCTCG TGAAACTGGT
CAAGAGAGTG TTCCGCATCA TTTACGTAAT GCACCAACAC AGTTAATGAA AGAAATAGGT
ATGGGGGAAG GGTACCGATA TGCTCACGAT GAACCTAATG CCTATGCCAG TGGTGAAAAT
TATTTCCCTG AGTCCCTAAA AACGGCCCAG TTTTACTTTC CCACTGAGCG TGGATTTGAA
AAGCGGATTA AGGATAAATT GATACAATTA ACCCAATTAG ACCAAGTCAG TGAGAACAAA
CGTTATGACT AA
|
|---|
| Protein sequence | MSSLSFNFAP DFRPLAARMR PRSIAEYIGQ AHLLGEGQPL RKALEAGRAH SMMLWGPPGT
GKTTLAELIA QYSNAHVERI SAVTSGVKEI RAAIEQAKAI AESRGQRTLL FVDEVHRFNK
SQQDAFLPFI EDGTVIFIGA TTENPSFEIN NALLSRARVY LIKRLSNNEI AHIVTQALAD
TERGLGLRQL EMPESVLIKL AQLCDGDARK ALNLLELMSD MVSDNDTFTL EMLVQVAGHQ
VAGFDKNGDQ FYDLISAVHK SIRGSAPDAA LYWYCRILEG GGDPLYVARR LLAIASEDVG
NADPAAMTIA LNAWDCFHRV GPAEGERAIA QAIVYLASAP KSNAVYTAFK AARALARETG
QESVPHHLRN APTQLMKEIG MGEGYRYAHD EPNAYASGEN YFPESLKTAQ FYFPTERGFE
KRIKDKLIQL TQLDQVSENK RYD
|
|---|
| |