Gene Sputcn32_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2001 
Symbol 
ID5078204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp2287659 
End bp2288318 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content41% 
IMG OID640499161 
Producthypothetical protein 
Protein accessionYP_001183521 
Protein GI146293097 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000304908 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG AAACACTGTA CTCGACGAGT ACGTCAACAT TGGAAGTGAA CAAACTTCTT 
AAAAACACTT ATATGCTGTT ATCGATGACG CTCGCTTTTT CTGCACTATG TGCAGGGTTG 
GCAATGATGC TCAATATCAG CCCATTAATG TCAATTGGCT TGTCAATTGG TGGTCTAGTG 
CTACTGTTTG TGACATTACG TAAAGCTGAA TCTGCTGCGG GTATTTTCTG GATTTTTGCT 
TTTACAGGTA TGGAAGGTGC ATCACTGGGC TATATGCTAA ATCACTATGC AGGTATGGCA 
AGTGGTCCAC AGCTGATCAT GCAAGCACTA GGTTTAACCT CAGTCATTTT TGTTGCCTTA 
TCAGCTTATG CGTTAACCAC TAAGAAAGAT TTTTCATTTT TACGAGGTTT TCTGTTTGCA 
GGTTTGATTG TTGTCATTGC TGCTGCGGTG ATTAATATTT TTGTGGGCAA CAGTGTCGCC 
TTTATGGCCA TTAACGCAGG GCTTGCGCTG TTAATGACGG GGTTTATCCT GTTTGATACT 
AGCCGTATCG TTAATGGTGG TGAAACCAAT TATATTCGTG CAACTATCTC CTTATACTTA 
GATTTTTTAA ACCTATTTAT TGCTATTTTG CACCTGATGG GCATCGGCAA CGATGACTGA
 
Protein sequence
MTQETLYSTS TSTLEVNKLL KNTYMLLSMT LAFSALCAGL AMMLNISPLM SIGLSIGGLV 
LLFVTLRKAE SAAGIFWIFA FTGMEGASLG YMLNHYAGMA SGPQLIMQAL GLTSVIFVAL 
SAYALTTKKD FSFLRGFLFA GLIVVIAAAV INIFVGNSVA FMAINAGLAL LMTGFILFDT 
SRIVNGGETN YIRATISLYL DFLNLFIAIL HLMGIGNDD