Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1986 |
Symbol | |
ID | 5078188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2272803 |
End bp | 2273318 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640499145 |
Product | hypothetical protein |
Protein accession | YP_001183506 |
Protein GI | 146293082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTCTCT CTTCAGCTTT TGTTCTGATC GACGCTGCAA CGCATGATTT GAAAGGCTTT GACTGCGGTA AACCCAGCCT CAATGACTAC CTGAGCCGGT TTGCTGTTCG TAACAGCTCC CTGGGGTTAA GTCGTACCTG GGTTTTGACG GAGCTCGTTG CTCAAGGCAA GGCTCCGGTT GCAGCTTATT TTACGTTAGC AAGCAGTACT GTCACCCGTG AATTATTGCC TTCTCAGCCC AAATCGCTGC CAGCCTATCC GGTGCCTGTT GTGCTGCTGG CCAGGCTCGG TGTTTCTCTC ACTCAGCAAG GGCGTCAACT AGGAGCTAAA ACCCTGGTTC AGGCGCTTCG TACCGCTCTT GAATTGACAG ACTCGGGGCT ACCAGCGCTT GGTGTGGTAC TGGACGTTCT GGATGAAGCA GCGCTGAAGT TTTACCAGCA TATGGGCCTA TTTACCCCAT TGACGGATCA GCCGATGCGT CTTTTTGTGC CGATGAGCAC GTTACGTCAG CTTTAA
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Protein sequence | MSLSSAFVLI DAATHDLKGF DCGKPSLNDY LSRFAVRNSS LGLSRTWVLT ELVAQGKAPV AAYFTLASST VTRELLPSQP KSLPAYPVPV VLLARLGVSL TQQGRQLGAK TLVQALRTAL ELTDSGLPAL GVVLDVLDEA ALKFYQHMGL FTPLTDQPMR LFVPMSTLRQ L
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