| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1970 |
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| Symbol | |
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| ID | 5078418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2257736 |
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| End bp | 2258980 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640499130 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001183491 |
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| Protein GI | 146293067 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATGA CACTAATGCT GCCAGCAATA CTGGCGGCGG TATTTTGCGC GCTTCCGCTA
CGTGCAGAGC CGCAAGCACT GACATTACAA CAGGCAATAG ATAAAACGCT GCAACACAAC
CCTCAGCTGC ATCAGTTTAA ATTTACGCAA CAGCGTCTGT TTGCAGAGCG TGATTTGCAA
AGCCTTAAAC CCGGTTATCA ACTCGGTGTA GAGCTTGAGA ATGTTGCGGG CACCGGAGAG
GCCAGAGGGC TGGCCGGTGC TGAGCTGACA ATCGCCTTAT CTTCCGTGAT AGAGCTGGAT
AATAAAGCTC AATGGCGCGC TGCGGTAGTA GACGCCAGGC TCAATACTCT TGAATGGCAG
CAACAGGCGC AAACCCTGGA TGTGCTGGCA GAGCTTACCC GCAATTATAT TAATCTATTG
GCCAGCCAGC AGGAATTGAC ACTGACAGAA GAGGCCGTAG CGCTCTCAGA AGCCCTGCTG
CAAAGCGCTG AAAAACGTGC TGCCAGCGGT GCCTTGTCAG ATGCTGAAAT CATGCGGGCA
AAGGCGCAAC TGGCGCAGGT TCAGATCGGG CGGGACGCCC TGTTGCAGCG CATTGAGCGG
CAAAAAATAG CCATAGCACG TTTTTGGGGT GATACCAGCG CCAACTTTAA CGTTGTGGCA
GGTAACTTGT TTGCTTTTGG CCAAAGCCGC CCTTTTGCTG AGCTGTATCA GCGGCTGCAA
CAATCGCCGG CGTTAACCAT TTTTGCCTCT GAACGTCGGT TAAAAGACGC TGAAGTGCGA
CTGGCACAAA GCCAGAATCG CGCCGATCTG AGTTGGCAGG TAGGGGTAAG ACGCTATCAG
GCCAGTGATG ATACAGGCCT TACCTTTGGT ATCTCAGTGC CGTTATTTGC TGAACGTCGC
AATAGTGCAG CCATCGAAGC TGCGCTGGCA GAGCGAAACA ATGTCGAGTA TCGACAGCAG
GATAGCTTAC TGATCCTGCA TGAACGCTTG TTTGATGCGT ACTCGCAACG ACAGCAATTT
ATTACCAGTC ACCAACAGTT GGCGCAGTAC GTGATCCCCA ACCTGGAACA AGCGCTGGAT
CTTACGCGTG ATGCATACCA GCGCGGGCGC TCAAATTATC AGGATTGGCT TAATGCCCAG
CAAGAATTGT TGCAGGCAAA AAGACACTTA CTGGAAACCG CCACTGCGGT GCTATTGAGC
CAGGCGACGA TTGAACAGCT TACCGCCGAG CCGGTAACGC AGTAA
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| Protein sequence | MRMTLMLPAI LAAVFCALPL RAEPQALTLQ QAIDKTLQHN PQLHQFKFTQ QRLFAERDLQ
SLKPGYQLGV ELENVAGTGE ARGLAGAELT IALSSVIELD NKAQWRAAVV DARLNTLEWQ
QQAQTLDVLA ELTRNYINLL ASQQELTLTE EAVALSEALL QSAEKRAASG ALSDAEIMRA
KAQLAQVQIG RDALLQRIER QKIAIARFWG DTSANFNVVA GNLFAFGQSR PFAELYQRLQ
QSPALTIFAS ERRLKDAEVR LAQSQNRADL SWQVGVRRYQ ASDDTGLTFG ISVPLFAERR
NSAAIEAALA ERNNVEYRQQ DSLLILHERL FDAYSQRQQF ITSHQQLAQY VIPNLEQALD
LTRDAYQRGR SNYQDWLNAQ QELLQAKRHL LETATAVLLS QATIEQLTAE PVTQ
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