| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1968 |
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| Symbol | |
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| ID | 5078416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2253506 |
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| End bp | 2256628 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640499128 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001183489 |
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| Protein GI | 146293065 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.126074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAT CCATGTTGCG CCTGGCTATT GCGAGGCGGT ATCTATTTTT AACGCTGACA
CTGTTGATTA TTGCCATTGG TAGCTGGAGC TACCAACAGT TACCGATTGA TGCAGTGCCG
GATATTACTA ACGTTCAGGT GCAAATAAAC ACGGCGGCGC CAGGTTATTC GCCACTTGAA
GCAGAGCAGC GTATTACCTA TCCGGTAGAA ACTGCCCTGT ATGGCTTACC CAATTTAAGT
TATACCCGCT CATTGTCACG CTATGGCTTG TCACAGGTAA CGGTGGTGTT TGAAGAAGGC
ACGGACATCT ACTTTGCCCG CAATTTAATC AACACCCGGT TGGGCGCTAT CAAGGATATG
TTGCCTGAGG GCATAGAGCC TGAAATGGGC CCTATTTCAA CCGGTCTTGG TGAAATCTTT
ATGTATACGG TGCAGGCCAA GCCGGGCGCG CTGCAACAAA ATGGTTCACC TTACGATGCC
ATGGCACTGC GGGAAATCCA GGACTGGATA ATAAAACCTC AGCTGGCACA GGTTAAAGGT
GTGGTGGAGG TAAACAGTAT TGGTGGCTAC AACAAGCAAT ACCATGTGTT ACCCGACCCA
CTGAAACTGC TTAATTATGG CCTGAGTATT AAGGATGTTG AACTGGCCCT GCAAGCCAAC
AATGACAACC GGGGTGCCGG TTATATTGAA CGTGAGGGCA TGCAACTGCT GGTACGCTCG
CCCGGTCAGT TAACCTCTCT GGATGACATT GCTAATGTCA TTATTACGCA ATACGACACA
ATACCGGTAA AGCTGAGTGA CGTTGCCGAT GTTGCCATTG GCAAAGAGCT GCGAACCGGT
GCGGCAACTC AGGATGGTAA AGAAGCTGTG CTGGGTACAG CCATGATGTT AATTGATGAA
AACTCACGCA CAGTGGCACG CGATGTCGCG CAAAAGCTGG AGCAGATCAA AAGCTCTCTG
CCAGAGGGTA TTATTGCTGA AGCCGTATAT GATCGCACCA CCTTAGTGGA TAAAGCCATT
GCAACCGTCA GTAAAAACCT GCTGGAAGGC GCATTACTGG TGATCGTAGT GTTGTTTATC
CTGCTGGGTA ACCTGCGGGC AGCGTTAATC ACTGCGGCAG TGATCCCGCT ATCAATGCTG
ATGACCATTA CCGGCATGGT ACAAGCCGGC GTTTCTGCCA ACCTGATGAG CCTGGGTGCG
CTGGATTTTG GCTTAATTGT TGATGGTACG GTGATTATTG TCGAGAATGC GGTTCGCCGC
CTGGCGCAGG CACAGCACAA CGGCCGTATC CAACCGCTAA AAGAGCGCTT AAATACGGTG
TATCTGGCAA CTGCAGAGGT TATCCGGCCT AGTTTGTTCG GTGTGGCCAT CATTACCATA
GTGTATATGC CTATTTTTTC GCTGACCGGT GTCGAAGGTA AAATGTTTCA TCCTATGGCA
GCGACTGTCG TTATTGCGCT GTTATCCGCC ATGGTGTTGT CACTGACCAT TGTACCAGCC
GCTGTGGCGG TGTTCTTAAA TGGTAAAATC AGTGAAAAAG AAAGTGCGGT TATCAGAAGC
GCTAAAACCT TGTACGCACC GCTATTAGCG CTGGCACTGA AATGGCGCGT TCTGGTCATC
GGTTTGGCCA GTGCTCTGGT TGGTGTGTGT CTGTGGCTGG CCACCACCCT GGGATCGGAG
TTTGTGCCTC AGCTTGATGA GGGCGATATC GCTTTACATG CCATGCGTAT TCCGGGCACC
GGCTTAGAAC AAGCCGTTGC AATGCAGGAA ATTCTGGAGC AGAAGATCAA AACCTTTGCT
GAGGTTGATA AAGTGTTTGC CAGAATTGGT ACGTCAGAAG TGGCGACCGA TCCGATGCCA
CCCAATGTGG CTGACAACTT TGTGATATTA AAGCCGCGCA GTGAATGGCC CAATCCGGAT
AAAACCAAAG CCCAATTGGT CACTGAAATG GAAGCTGCTT TGGCGACATT GCCTGGCAAT
AACTATGAAT TTACCCAACC TATTCAGATG CGTTTTAATG AACTGATTTC CGGTGTACGG
GCAGATCTGG GTATTAAGGT ATTTGGTGAT GATTTAGATC AGCTGGTTAC AAGCGCTAAT
CAAATTCTGC AAGCAGTCAA CAAGGTGCAA GGTGCTGCGG ATATTAAAGT CGAACAAGTC
ACTGGCTTGC CAACCTTGTC GGTGATCCCC AACCGAACCG CGCTTGCCCG TTACGGCTTA
AACGTGGTTG AACTACAGGA CTGGGTATCA GCAGCAATTG GTGGTACGTC GGCCGGTATT
CTGTATGAAG GTGACAGACG CTTTGAGCTG ATAGTGCGCC TGCCGGAAAC CCTGCGTCGC
GATCTGGACA AACTGGCAGT GTTGCCGGTG CCATTGCCAA ATGGGGACTT TGTGCCGTTA
CAAGAAGTGG CTACCTTAGA TTTGTCGCCT GCGCCGGCGC AAATTAGTCG TGAAAACGGC
AAACGCCGGG TAGTGGTAAC CGCGAATGTG CGCGGGCGAG ACCTTGGCAG TTTTGTAGAA
GAGGTAAAGG CCCAAATCAA CCGCGACGTT GCATTACCAG CCGGTTACTG GCTGGATTAT
GGCGGTACTT TTGAGCAGCT GGAGTCAGCC AGTCAGCGCC TTAGCATCGT GGTGCCTGTT
ACGTTGCTGC TGATTTTAGG TATTCTGGTG ATGGCTTTTG CGTCATTTAA AGATGCGTTG
ATTATCTTCA GCGGTGTGCC GTTGGCGCTC ACCGGTGGTG TATTGGCCTT GTATTTGAGG
GGTATGCCTT TATCAATCTC TGCCGGCATT GGCTTTATCG CCTTATCAGG TGTGGCGGTG
CTGAACGGCC TGGTGATGCT GAGCTTTATT CGCGATCTCT GGCGTGAAAA AGGTGACTTG
CTGCTTGCGA TAACGGAAGG CGCGCTTACC CGGTTGCGCC CTGTGCTAAT GACCGCTTTG
GTCGCGAGCC TCGGTTTTGT GCCGATGGCG ATTAATATTG GCACCGGTGC GGAAGTCCAG
CGCCCCTTGG CCACAGTGGT TATCGGCGGG ATTATTTCCT CGACGCTGCT GACGTTGTTT
GTGTTACCCG TTTTATATCA CTGGCTTCAT AGCAAATTTA GCGCGACCAA GCCAAAGAAT
TAG
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| Protein sequence | MIESMLRLAI ARRYLFLTLT LLIIAIGSWS YQQLPIDAVP DITNVQVQIN TAAPGYSPLE
AEQRITYPVE TALYGLPNLS YTRSLSRYGL SQVTVVFEEG TDIYFARNLI NTRLGAIKDM
LPEGIEPEMG PISTGLGEIF MYTVQAKPGA LQQNGSPYDA MALREIQDWI IKPQLAQVKG
VVEVNSIGGY NKQYHVLPDP LKLLNYGLSI KDVELALQAN NDNRGAGYIE REGMQLLVRS
PGQLTSLDDI ANVIITQYDT IPVKLSDVAD VAIGKELRTG AATQDGKEAV LGTAMMLIDE
NSRTVARDVA QKLEQIKSSL PEGIIAEAVY DRTTLVDKAI ATVSKNLLEG ALLVIVVLFI
LLGNLRAALI TAAVIPLSML MTITGMVQAG VSANLMSLGA LDFGLIVDGT VIIVENAVRR
LAQAQHNGRI QPLKERLNTV YLATAEVIRP SLFGVAIITI VYMPIFSLTG VEGKMFHPMA
ATVVIALLSA MVLSLTIVPA AVAVFLNGKI SEKESAVIRS AKTLYAPLLA LALKWRVLVI
GLASALVGVC LWLATTLGSE FVPQLDEGDI ALHAMRIPGT GLEQAVAMQE ILEQKIKTFA
EVDKVFARIG TSEVATDPMP PNVADNFVIL KPRSEWPNPD KTKAQLVTEM EAALATLPGN
NYEFTQPIQM RFNELISGVR ADLGIKVFGD DLDQLVTSAN QILQAVNKVQ GAADIKVEQV
TGLPTLSVIP NRTALARYGL NVVELQDWVS AAIGGTSAGI LYEGDRRFEL IVRLPETLRR
DLDKLAVLPV PLPNGDFVPL QEVATLDLSP APAQISRENG KRRVVVTANV RGRDLGSFVE
EVKAQINRDV ALPAGYWLDY GGTFEQLESA SQRLSIVVPV TLLLILGILV MAFASFKDAL
IIFSGVPLAL TGGVLALYLR GMPLSISAGI GFIALSGVAV LNGLVMLSFI RDLWREKGDL
LLAITEGALT RLRPVLMTAL VASLGFVPMA INIGTGAEVQ RPLATVVIGG IISSTLLTLF
VLPVLYHWLH SKFSATKPKN
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