Gene Sputcn32_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1964 
Symbol 
ID5078412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2248819 
End bp2249634 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content50% 
IMG OID640499124 
Productintegrase catalytic subunit 
Protein accessionYP_001183485 
Protein GI146293061 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGCGG TGCTTCAGGT GTCGCGTAGT GGGTATTATG CCTGGCGTAA AACGGGCCTG 
ACACCAAGCC CGAGGGCTGC GAAGCGTGCA AAGCGTGACG TGCTGATAAA GAAGGCGTTT
GACGACTCCA AAGCACGTAA TGGCTCCAGA CGTATTCAGG TAGACCTTGC TGAGCATGGC
AAGAAACCGG ATATAAAAAC CATACTGAAC AGCATGGAGC GCCAGGGTTT AGTGGCTAAA
GCGGCCCGCA AGTTTAAAGT GACGACCGAC AGCAAGCATT CGCTGCCAGT AGCCCCAAAC
TTGCTTGAAC AGGATTTTAG CGCAACAGGC CCGAACCAAA AATGGGTCGG TGATATCACG
TACCTGATGA CCAGCGAAGG CTGGCTGTAT CTGGCGGTAA TCATTGATCT GTACTCGCGG
GCAGTAATTG GCTGGTCGAT GAGCAACCGT ATGACAGCAG ATCTGGTGTG CAGCGCATTG
AACATGGCGT TGTTCCGTCG CGGCTTCCCT AAATCGGTGA TCGTTCATAG TGATCGCGGC
AGCCAGTATT GCTCGCATGA TTACCGTGAC TTGATTAAAA AGCACCAGTT GCTACAAAGC
ATGAGCCGTA AAGGCAACTG CTGGGACAAT GCGGTAGCGG AAAGCTTCTT CCATTCATTG
AAGGTTGAAA CGCTTCAGGA CGAGCCGATA ATGGATCGGG AAACAATGCG CCAACACGTT
TTTGAATACA TTGAGGTTGA TTACAATAAG ACCAGAAGGC ATAGTGCTCT TGGCTATCTT
AGCCCAGAGA ATTTTGAATT GAAGAACAGT GCTTAG
 
Protein sequence
MVAVLQVSRS GYYAWRKTGL TPSPRAAKRA KRDVLIKKAF DDSKARNGSR RIQVDLAEHG 
KKPDIKTILN SMERQGLVAK AARKFKVTTD SKHSLPVAPN LLEQDFSATG PNQKWVGDIT
YLMTSEGWLY LAVIIDLYSR AVIGWSMSNR MTADLVCSAL NMALFRRGFP KSVIVHSDRG
SQYCSHDYRD LIKKHQLLQS MSRKGNCWDN AVAESFFHSL KVETLQDEPI MDRETMRQHV
FEYIEVDYNK TRRHSALGYL SPENFELKNS A