Gene Sputcn32_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1956 
Symbol 
ID5078404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2241506 
End bp2242474 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content44% 
IMG OID640499117 
Productcytochrome c oxidase, cbb3-type, subunit III 
Protein accessionYP_001183478 
Protein GI146293054 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGCT TCTGGAGTAT TTGGATTACC GTACTCTCGT TAGTGGTGAT CGCAGGTTGT 
TTTATTTTAC TTAAAGTGTG TTCTAAGAAC ACCACTGACG TAAAAGAAGG CGAATCTATG 
GGTCATAGCT TCGACGGTAT TGAAGAGATG AACAATCCAC TACCAAAATG GTGGAGTTAC 
ATGTTCTATA TCACGATTGT CTTTGGTTTA ATTTACCTTG CCTTATATCC TGGTTTAGGT 
AATTACCAAG GCCTCTTAGG TTGGAGCAGT GCAAACCAAA GTATTGGTAC TGATAAAGGT 
ATAAAAGCCG ACTCAGCCGC AGCGGTGGAA CTCGCGAACA AGGAAGGCCG TTGGGTACAG 
TACGATCAAG AAGTAAAGCA AGCGGATGAT AAATATGGTC CTATTTTTGC TGCTTATTTG 
GCAACACCAC TAGAAGAACT AGTTAAAAAC CAAGAAGCAT TAAAAGTGGG CGGCCGTTTG 
TTTTTACAAA ACTGTGCACA ATGCCATGGT AGTGATGCGC GTGGTAGCAA AGGTTTCCCT 
AACCTTACTG ATGGCGATTG GTTGTACGGT GGTGATTTAG CGACAATCAA AACCACTATT 
ATGAGTGGCC GTCATGGCAT GATGCCGCCA AAAGGTGGTT TGCCAATCGA GGATAGTGAA 
ATTGCAGGCT TAGCAGAATA CGTTGTTAAA CTGTCTGGCC GCGAGCACGA TGCGACACTG 
GCTGCTCAAG GGCAAGGTTC ATTCATGAAA GGTTGCTTTG CCTGTCATGG AATGGACGCA 
AAAGGCAATA AATTCATGGG CGCCCCCGAT TTAACCGACG ATATTTGGTT ATATGGTGGT 
AGCCGCGGCG TGATTGAAGA AAGTATCAAA CATGGTCGTT CAGGCGTTAT GCCTGCGTGG 
AAAGATGTTC TCGGTGAAGA AAAAGTTCAT GTGATCACTG CTTATGTTTA TAGCTTATCA 
AACAAGTAA
 
Protein sequence
MSSFWSIWIT VLSLVVIAGC FILLKVCSKN TTDVKEGESM GHSFDGIEEM NNPLPKWWSY 
MFYITIVFGL IYLALYPGLG NYQGLLGWSS ANQSIGTDKG IKADSAAAVE LANKEGRWVQ 
YDQEVKQADD KYGPIFAAYL ATPLEELVKN QEALKVGGRL FLQNCAQCHG SDARGSKGFP 
NLTDGDWLYG GDLATIKTTI MSGRHGMMPP KGGLPIEDSE IAGLAEYVVK LSGREHDATL 
AAQGQGSFMK GCFACHGMDA KGNKFMGAPD LTDDIWLYGG SRGVIEESIK HGRSGVMPAW 
KDVLGEEKVH VITAYVYSLS NK