Gene Sputcn32_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1955 
Symbol 
ID5078403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2240918 
End bp2241397 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content40% 
IMG OID640499116 
Producthypothetical protein 
Protein accessionYP_001183477 
Protein GI146293053 
COG category[S] Function unknown 
COG ID[COG3198] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC AACAAGCTTG GTATAAACAA TTCTGGCCTT GGTTTTTAAT TATTCTTCCT 
TTATGTGCAG TCGTTGCAAG TTTTACCACG CTAAAAATTG CCCTTTCCAA CTCAGATTCA
CTTGTCGCTG AAGATTATTA TAAAGATGGT AAAGCCATTA ACATGGATTT GAGTAAAGTG
AAATACGCCA AACAAATAGG CATGAATTTT TCACTTGAAC AAGCTAATAA TGAGATTTTG
TTGACACAAC AAGGTGGCCC ATCTTACCAA GCAGCCTTGA AAGTCGAGTT TTATCATCCA
ACTATTGCCG AAAGAGACAT AAAACTGACC GCAACGGCCG ATGCCAGTAA TGTGTATCGC
ATTACTATTC CCACCACATT AACCGGCCCT TGGGAAGTGC GTCTCGAGGG CTACGATGGC
AAATGGCGAA TTCACCAACG TGTTGAATTA AAAGATAGTA TCCAGTTGTG GTTGAATTAG
 
Protein sequence
MTEQQAWYKQ FWPWFLIILP LCAVVASFTT LKIALSNSDS LVAEDYYKDG KAINMDLSKV 
KYAKQIGMNF SLEQANNEIL LTQQGGPSYQ AALKVEFYHP TIAERDIKLT ATADASNVYR
ITIPTTLTGP WEVRLEGYDG KWRIHQRVEL KDSIQLWLN