Gene Sputcn32_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1950 
Symbol 
ID5078398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2235603 
End bp2236535 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content43% 
IMG OID640499111 
Productuniversal stress protein UspE 
Protein accessionYP_001183472 
Protein GI146293048 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATT ATCAAAAAAT ACTGGTTGTA GTAGACCCTA CTACCGAAAA TCAAGTTGCA 
CTCGCCCGTG CGGTAACCTT GGCCAGTAAA AGTAACGCCC ATGTGACTGT GTTTCTCTCT
ATTTTTGATT TCTCCTATGA AATGACATCG ATTTTATCGA GCCAAGAACG TGAAGCTATG
CGTCAAGGCG TTATCGATCA ACGCTTGGCT TGGATTCAAG ATCTGCTTGC CGCATACAGT
CATTTACAGC TCAGTATTGA TACCCAGGTA ATCTGGCACA ATCGTCCTTT TGAAAGCATT
ATTAACCACG CCATCGCTGG CCACTATGAT TTGATTGTTA AGGGCACTCA TGCCCATGAC
AAACTCAAAG CGGTCATTTT TACACCAACT GATTGGCATT TAATGCGTAA AGCACCTGTT
CCAGTGCTCA TGGTTAAAGA ACGTGACTGG CCGGCTGCAG GCAAAATTCT GTGTGCCGTC
AATGTGGCTA CCGAAGATAC CGATCATCAA ATGCTCAATG GTAAAATTAT TGAACATGCA
AAAGATCTTG CGCTTAAGTT TGCCGCTGAG GTGCATTTAG TTAATGGCTA CCCTGGCACA
CCCGTTAATT TAGCCATTGA ATTACCAGAC TTTGATGCAC AGACCTATAA CAATACTATC
CGTATCCAAC ATGAAGATCG TGTTAGTTAT CTCGCGAATG CCTATGGTAT CGATAGCAAT
CACTGTCATG TGAAAGAGGG GTTACCTGAA GATGTTATAC CTGATCTTGC TGCTCAGTTA
GATGCTGAAT TAGTCATCCT AGGAACCGTA GGGCGAACAG GATTTTCAGC CGCACTTATC
GGTAATACGG CTGAGCATGT TATCGATAGC ATCAATTGCG ACTTACTGGC TATCAAACCC
GATGGTTATA AATCCCCCTT AGAAGAAACC TAA
 
Protein sequence
MKDYQKILVV VDPTTENQVA LARAVTLASK SNAHVTVFLS IFDFSYEMTS ILSSQEREAM 
RQGVIDQRLA WIQDLLAAYS HLQLSIDTQV IWHNRPFESI INHAIAGHYD LIVKGTHAHD
KLKAVIFTPT DWHLMRKAPV PVLMVKERDW PAAGKILCAV NVATEDTDHQ MLNGKIIEHA
KDLALKFAAE VHLVNGYPGT PVNLAIELPD FDAQTYNNTI RIQHEDRVSY LANAYGIDSN
HCHVKEGLPE DVIPDLAAQL DAELVILGTV GRTGFSAALI GNTAEHVIDS INCDLLAIKP
DGYKSPLEET