Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1950 |
Symbol | |
ID | 5078398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2235603 |
End bp | 2236535 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640499111 |
Product | universal stress protein UspE |
Protein accession | YP_001183472 |
Protein GI | 146293048 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGATT ATCAAAAAAT ACTGGTTGTA GTAGACCCTA CTACCGAAAA TCAAGTTGCA CTCGCCCGTG CGGTAACCTT GGCCAGTAAA AGTAACGCCC ATGTGACTGT GTTTCTCTCT ATTTTTGATT TCTCCTATGA AATGACATCG ATTTTATCGA GCCAAGAACG TGAAGCTATG CGTCAAGGCG TTATCGATCA ACGCTTGGCT TGGATTCAAG ATCTGCTTGC CGCATACAGT CATTTACAGC TCAGTATTGA TACCCAGGTA ATCTGGCACA ATCGTCCTTT TGAAAGCATT ATTAACCACG CCATCGCTGG CCACTATGAT TTGATTGTTA AGGGCACTCA TGCCCATGAC AAACTCAAAG CGGTCATTTT TACACCAACT GATTGGCATT TAATGCGTAA AGCACCTGTT CCAGTGCTCA TGGTTAAAGA ACGTGACTGG CCGGCTGCAG GCAAAATTCT GTGTGCCGTC AATGTGGCTA CCGAAGATAC CGATCATCAA ATGCTCAATG GTAAAATTAT TGAACATGCA AAAGATCTTG CGCTTAAGTT TGCCGCTGAG GTGCATTTAG TTAATGGCTA CCCTGGCACA CCCGTTAATT TAGCCATTGA ATTACCAGAC TTTGATGCAC AGACCTATAA CAATACTATC CGTATCCAAC ATGAAGATCG TGTTAGTTAT CTCGCGAATG CCTATGGTAT CGATAGCAAT CACTGTCATG TGAAAGAGGG GTTACCTGAA GATGTTATAC CTGATCTTGC TGCTCAGTTA GATGCTGAAT TAGTCATCCT AGGAACCGTA GGGCGAACAG GATTTTCAGC CGCACTTATC GGTAATACGG CTGAGCATGT TATCGATAGC ATCAATTGCG ACTTACTGGC TATCAAACCC GATGGTTATA AATCCCCCTT AGAAGAAACC TAA
|
Protein sequence | MKDYQKILVV VDPTTENQVA LARAVTLASK SNAHVTVFLS IFDFSYEMTS ILSSQEREAM RQGVIDQRLA WIQDLLAAYS HLQLSIDTQV IWHNRPFESI INHAIAGHYD LIVKGTHAHD KLKAVIFTPT DWHLMRKAPV PVLMVKERDW PAAGKILCAV NVATEDTDHQ MLNGKIIEHA KDLALKFAAE VHLVNGYPGT PVNLAIELPD FDAQTYNNTI RIQHEDRVSY LANAYGIDSN HCHVKEGLPE DVIPDLAAQL DAELVILGTV GRTGFSAALI GNTAEHVIDS INCDLLAIKP DGYKSPLEET
|
| |