| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1946 |
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| Symbol | |
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| ID | 5078394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2231813 |
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| End bp | 2232736 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499107 |
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| Product | protein of unknown function UPF0052 and CofD |
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| Protein accession | YP_001183468 |
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| Protein GI | 146293044 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATC AAATGTTAAA TCAATTTAAT CATGTCGTTG CCATAGGTGG AGGCCATGGT
TTAGGAAGAG TGCTCTCTTC GCTTGATTTT CTAGGTAAAC GCCTTACGGG AATTGTGGCC
ACCACTGATA ATGGAGGATC AACAGGTCGC CTTAGAGCAC AACAAAATTG CATTGCATGG
GGTGATCTTC GCAACTGCCT TTCTCACCTA GCTAACCGCC CTTCCATTGG CTCTGAACTA
TTTGAATATC GCTTTCAAGG TGAAACTGAA CTGAGTGGCC ATAATTTAGG CAACCTTATT
TTGCTAGCAC TCGATCAGCT TTGTGTTCGA CCGCTTGAAG CCGTTAATCT TATTCGTAGC
TTATTGAATA TTGAAACTCA ACTTATCCCT ATGTCAGAGC AGCCGACTCA TTTAGTCGCA
ATCCAAGCCT GTGGGAGTAA GGTTTTTGGT GAAACGAATG TAGATAGTAT GGCGGATGTA
CCTATCGCAT TGTGTCTTGA ACCACAGGTA GATGCGACTT TTGAAGCCTG TCAGGCCGTA
CTTAATGCGG ATTTAATTAT CATAGGACCA GGTAGCTTTT TAACCAGTAT CATGCCACCG
CTACTGTTAC CACGTTTCGC TAAAAGTTTA GCCGCAACTA AAGCACAGAT AATCTTTATC
GATAATTTGT ATCCAGAGTT ATCTCCTGCG GGTCAATTTA GCCTAGAACA GCGGATCTCT
TGGTGCCACC AGGTTATTGG TCGTCCTGTT ATAAGCCAAG TGCTACGCCA TGGTGATCAA
ATTCGCTTAG GTTCATTTAT TAATGACTTC CCTTTAAAGA ATCATCATAA CCCCAATCTG
CACGATCACG CAGGTCTTCG GGAAGCATTA AGTGCATTGC TACGTCTAAA ATTGGATCTG
ACAATGCATC CTCTCGCCTC TTAA
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| Protein sequence | MQYQMLNQFN HVVAIGGGHG LGRVLSSLDF LGKRLTGIVA TTDNGGSTGR LRAQQNCIAW
GDLRNCLSHL ANRPSIGSEL FEYRFQGETE LSGHNLGNLI LLALDQLCVR PLEAVNLIRS
LLNIETQLIP MSEQPTHLVA IQACGSKVFG ETNVDSMADV PIALCLEPQV DATFEACQAV
LNADLIIIGP GSFLTSIMPP LLLPRFAKSL AATKAQIIFI DNLYPELSPA GQFSLEQRIS
WCHQVIGRPV ISQVLRHGDQ IRLGSFINDF PLKNHHNPNL HDHAGLREAL SALLRLKLDL
TMHPLAS
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